Difference between revisions of "SJ02711"

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(Created page with "Category:metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-11527 CPD-11527] == * common-name: ** 3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3r-hydroxyb...")
 
(Created page with "Category:gene == Gene SJ02711 == * transcription-direction: ** positive * right-end-position: ** 208807 * left-end-position: ** 207920 * centisome-position: ** 38.912937...")
 
(9 intermediate revisions by 4 users not shown)
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[[Category:metabolite]]
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[[Category:gene]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-11527 CPD-11527] ==
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== Gene SJ02711 ==
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* common-name:
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* transcription-direction:
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** 3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3r-hydroxybutanoyl)-coa
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** positive
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* smiles:
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* right-end-position:
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** ccc=ccc1(c(ccc(=o)1)cc(o)cc(=o)sccnc(=o)ccnc(=o)c(o)c(c)(c)cop(=o)(op(=o)(occ2(c(op([o-])(=o)[o-])c(o)c(o2)n4(c3(=c(c(n)=nc=n3)n=c4))))[o-])[o-])
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** 208807
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* inchi-key:
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* left-end-position:
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** yufhotsrmdfgns-gbypgrtbsa-j
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** 207920
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* molecular-weight:
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* centisome-position:
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** 999.813
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** 38.912937   
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== Reaction(s) known to consume the compound ==
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== Organism(s) associated with this gene  ==
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* [[RXN-10703]]
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* [[S.japonica_carotenoid_curated]]
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== Reaction(s) known to produce the compound ==
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== Reaction(s) associated ==
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* [[RXN-10705]]
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* [[RXN-15561]]
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== Reaction(s) of unknown directionality ==
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** Category: [[annotation]]
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{{#set: common-name=3-oxo-2-(cis-2'-pentenyl)-cyclopentane-1-(3r-hydroxybutanoyl)-coa}}
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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{{#set: inchi-key=inchikey=yufhotsrmdfgns-gbypgrtbsa-j}}
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* [[UBIQUITIN--PROTEIN-LIGASE-RXN]]
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{{#set: molecular-weight=999.813}}
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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== Pathway(s) associated ==
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* [[PWY-7511]]
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** '''7''' reactions found over '''9''' reactions in the full pathway
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{{#set: transcription-direction=positive}}
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{{#set: right-end-position=208807}}
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{{#set: left-end-position=207920}}
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{{#set: centisome-position=38.912937    }}
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{{#set: organism associated=S.japonica_carotenoid_curated}}
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{{#set: nb reaction associated=2}}
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{{#set: nb pathway associated=1}}

Latest revision as of 11:03, 18 March 2021

Gene SJ02711

  • transcription-direction:
    • positive
  • right-end-position:
    • 208807
  • left-end-position:
    • 207920
  • centisome-position:
    • 38.912937

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-7511
    • 7 reactions found over 9 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ02711&oldid=132919"