Difference between revisions of "SJ02713"

From metabolic_network
Jump to navigation Jump to search
(Created page with "Category:gene == Gene SJ05645 == * transcription-direction: ** negative * right-end-position: ** 14528 * left-end-position: ** 9605 * centisome-position: ** 10.693610...")
(Created page with "Category:gene == Gene SJ02713 == * transcription-direction: ** positive * right-end-position: ** 46127 * left-end-position: ** 26609 * centisome-position: ** 4.979965...")
 
Line 1: Line 1:
 
[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ05645 ==
+
== Gene SJ02713 ==
 
* transcription-direction:
 
* transcription-direction:
−
** negative
+
** positive
 
* right-end-position:
 
* right-end-position:
−
** 14528
+
** 46127
 
* left-end-position:
 
* left-end-position:
−
** 9605
+
** 26609
 
* centisome-position:
 
* centisome-position:
−
** 10.693610    
+
** 4.979965    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[2.7.10.1-RXN]]
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 +
* [[1.1.1.145-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[2.7.12.1-RXN]]
+
* [[RXN-12693]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[PROTEIN-KINASE-RXN]]
+
* [[RXN-12747]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN-14906]]
+
* [[RXN-12789]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
{{#set: transcription-direction=negative}}
+
* [[RXN-1882]]
−
{{#set: right-end-position=14528}}
+
** Category: [[annotation]]
−
{{#set: left-end-position=9605}}
+
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
{{#set: centisome-position=10.693610   }}
+
** Category: [[orthology]]
 +
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 +
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[RXN66-342]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN66-350]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN66-353]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
</div>
 +
== Pathway(s) associated ==
 +
* [[PWY-6946]]
 +
** '''6''' reactions found over '''22''' reactions in the full pathway
 +
* [[PWY-6944]]
 +
** '''2''' reactions found over '''25''' reactions in the full pathway
 +
* [[PWY-6948]]
 +
** '''2''' reactions found over '''18''' reactions in the full pathway
 +
* [[PWY-5115]]
 +
** '''1''' reactions found over '''1''' reactions in the full pathway
 +
* [[PWY4FS-13]]
 +
** '''2''' reactions found over '''3''' reactions in the full pathway
 +
* [[PWY4FS-12]]
 +
** '''2''' reactions found over '''2''' reactions in the full pathway
 +
* [[PWY-882]]
 +
** '''6''' reactions found over '''5''' reactions in the full pathway
 +
* [[PWY66-378]]
 +
** '''3''' reactions found over '''6''' reactions in the full pathway
 +
* [[PWY-7299]]
 +
** '''1''' reactions found over '''2''' reactions in the full pathway
 +
{{#set: transcription-direction=positive}}
 +
{{#set: right-end-position=46127}}
 +
{{#set: left-end-position=26609}}
 +
{{#set: centisome-position=4.979965   }}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=4}}
+
{{#set: nb reaction associated=8}}
 +
{{#set: nb pathway associated=9}}

Latest revision as of 11:00, 18 March 2021

Gene SJ02713

  • transcription-direction:
    • positive
  • right-end-position:
    • 46127
  • left-end-position:
    • 26609
  • centisome-position:
    • 4.979965

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-6946
    • 6 reactions found over 22 reactions in the full pathway
  • PWY-6944
    • 2 reactions found over 25 reactions in the full pathway
  • PWY-6948
    • 2 reactions found over 18 reactions in the full pathway
  • PWY-5115
    • 1 reactions found over 1 reactions in the full pathway
  • PWY4FS-13
    • 2 reactions found over 3 reactions in the full pathway
  • PWY4FS-12
    • 2 reactions found over 2 reactions in the full pathway
  • PWY-882
    • 6 reactions found over 5 reactions in the full pathway
  • PWY66-378
    • 3 reactions found over 6 reactions in the full pathway
  • PWY-7299
    • 1 reactions found over 2 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ02713&oldid=131678"