Difference between revisions of "SJ02713"

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(Created page with "Category:metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=Glycoprotein-Asn-oligosaccharides Glycoprotein-Asn-oligosaccharides] == * common-name: ** a [gl...")
(Created page with "Category:gene == Gene SJ02713 == * transcription-direction: ** positive * right-end-position: ** 46127 * left-end-position: ** 26609 * centisome-position: ** 4.979965...")
 
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[[Category:metabolite]]
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[[Category:gene]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=Glycoprotein-Asn-oligosaccharides Glycoprotein-Asn-oligosaccharides] ==
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== Gene SJ02713 ==
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* common-name:
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* transcription-direction:
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** a [glycoprotein]-l-asparagine-[oligosaccharide]
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** positive
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== Reaction(s) known to consume the compound ==
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* right-end-position:
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* [[RXN-16761]]
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** 46127
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== Reaction(s) known to produce the compound ==
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* left-end-position:
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* [[RXN-16761]]
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** 26609
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== Reaction(s) of unknown directionality ==
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* centisome-position:
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{{#set: common-name=a [glycoprotein]-l-asparagine-[oligosaccharide]}}
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** 4.979965   
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== Organism(s) associated with this gene  ==
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* [[S.japonica_carotenoid_curated]]
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== Reaction(s) associated ==
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<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
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* [[1.1.1.145-RXN]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN-12693]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN-12747]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN-12789]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN-1882]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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** Category: [[orthology]]
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*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
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*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
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*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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* [[RXN66-342]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN66-350]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN66-353]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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</div>
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== Pathway(s) associated ==
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* [[PWY-6946]]
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** '''6''' reactions found over '''22''' reactions in the full pathway
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* [[PWY-6944]]
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** '''2''' reactions found over '''25''' reactions in the full pathway
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* [[PWY-6948]]
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** '''2''' reactions found over '''18''' reactions in the full pathway
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* [[PWY-5115]]
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** '''1''' reactions found over '''1''' reactions in the full pathway
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* [[PWY4FS-13]]
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** '''2''' reactions found over '''3''' reactions in the full pathway
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* [[PWY4FS-12]]
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** '''2''' reactions found over '''2''' reactions in the full pathway
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* [[PWY-882]]
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** '''6''' reactions found over '''5''' reactions in the full pathway
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* [[PWY66-378]]
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** '''3''' reactions found over '''6''' reactions in the full pathway
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* [[PWY-7299]]
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** '''1''' reactions found over '''2''' reactions in the full pathway
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{{#set: transcription-direction=positive}}
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{{#set: right-end-position=46127}}
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{{#set: left-end-position=26609}}
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{{#set: centisome-position=4.979965    }}
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{{#set: organism associated=S.japonica_carotenoid_curated}}
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{{#set: nb reaction associated=8}}
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{{#set: nb pathway associated=9}}

Latest revision as of 11:00, 18 March 2021

Gene SJ02713

  • transcription-direction:
    • positive
  • right-end-position:
    • 46127
  • left-end-position:
    • 26609
  • centisome-position:
    • 4.979965

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-6946
    • 6 reactions found over 22 reactions in the full pathway
  • PWY-6944
    • 2 reactions found over 25 reactions in the full pathway
  • PWY-6948
    • 2 reactions found over 18 reactions in the full pathway
  • PWY-5115
    • 1 reactions found over 1 reactions in the full pathway
  • PWY4FS-13
    • 2 reactions found over 3 reactions in the full pathway
  • PWY4FS-12
    • 2 reactions found over 2 reactions in the full pathway
  • PWY-882
    • 6 reactions found over 5 reactions in the full pathway
  • PWY66-378
    • 3 reactions found over 6 reactions in the full pathway
  • PWY-7299
    • 1 reactions found over 2 reactions in the full pathway




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