Difference between revisions of "SJ02725"

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(Created page with "Category:gene == Gene SJ00877 == * transcription-direction: ** positive * right-end-position: ** 76097 * left-end-position: ** 65701 * centisome-position: ** 40.82709...")
(Created page with "Category:gene == Gene SJ02725 == * transcription-direction: ** negative * right-end-position: ** 79587 * left-end-position: ** 70657 * centisome-position: ** 13.223699...")
 
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[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ00877 ==
+
== Gene SJ02725 ==
 
* transcription-direction:
 
* transcription-direction:
−
** positive
+
** negative
 
* right-end-position:
 
* right-end-position:
−
** 76097
+
** 79587
 
* left-end-position:
 
* left-end-position:
−
** 65701
+
** 70657
 
* centisome-position:
 
* centisome-position:
−
** 40.82709    
+
** 13.223699    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[GTP-CYCLOHYDRO-I-RXN]]
+
* [[2.7.10.1-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
** Category: [[orthology]]
+
* [[2.7.12.1-RXN]]
−
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
+
** Category: [[annotation]]
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
+
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
== Pathway(s) associated ==
+
* [[PROTEIN-KINASE-RXN]]
−
* [[PWY0-1433]]
+
** Category: [[annotation]]
−
** '''1''' reactions found over '''4''' reactions in the full pathway
+
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[PWY-7442]]
+
* [[RXN-14906]]
−
** '''3''' reactions found over '''7''' reactions in the full pathway
+
** Category: [[annotation]]
−
* [[PWY-6703]]
+
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
** '''1''' reactions found over '''4''' reactions in the full pathway
+
{{#set: transcription-direction=negative}}
−
* [[PWY-7852]]
+
{{#set: right-end-position=79587}}
−
** '''2''' reactions found over '''3''' reactions in the full pathway
+
{{#set: left-end-position=70657}}
−
* [[PWY-6147]]
+
{{#set: centisome-position=13.223699   }}
−
** '''5''' reactions found over '''5''' reactions in the full pathway
 
−
* [[PWY-5664]]
 
−
** '''2''' reactions found over '''4''' reactions in the full pathway
 
−
* [[PWY-6983]]
 
−
** '''2''' reactions found over '''4''' reactions in the full pathway
 
−
* [[PWY-5663]]
 
−
** '''3''' reactions found over '''4''' reactions in the full pathway
 
−
{{#set: transcription-direction=positive}}
 
−
{{#set: right-end-position=76097}}
 
−
{{#set: left-end-position=65701}}
 
−
{{#set: centisome-position=40.82709   }}
 
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=1}}
+
{{#set: nb reaction associated=4}}
−
{{#set: nb pathway associated=8}}
 

Latest revision as of 11:04, 18 March 2021

Gene SJ02725

  • transcription-direction:
    • negative
  • right-end-position:
    • 79587
  • left-end-position:
    • 70657
  • centisome-position:
    • 13.223699

Organism(s) associated with this gene

Reaction(s) associated




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ02725&oldid=133400"