Difference between revisions of "SJ02796"
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(Created page with "Category:gene == Gene SJ21849 == * transcription-direction: ** positive * right-end-position: ** 39647 * left-end-position: ** 27782 * centisome-position: ** 15.021764...") |
(Created page with "Category:gene == Gene SJ13518 == * transcription-direction: ** negative * right-end-position: ** 118248 * left-end-position: ** 102501 * centisome-position: ** 30.633984...") |
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| Line 1: | Line 1: | ||
[[Category:gene]] | [[Category:gene]] | ||
| − | == Gene | + | == Gene SJ13518 == |
* transcription-direction: | * transcription-direction: | ||
| − | ** | + | ** negative |
* right-end-position: | * right-end-position: | ||
| − | ** | + | ** 118248 |
* left-end-position: | * left-end-position: | ||
| − | ** | + | ** 102501 |
* centisome-position: | * centisome-position: | ||
| − | ** | + | ** 30.633984 |
== Organism(s) associated with this gene == | == Organism(s) associated with this gene == | ||
* [[S.japonica_carotenoid_curated]] | * [[S.japonica_carotenoid_curated]] | ||
== Reaction(s) associated == | == Reaction(s) associated == | ||
| − | * [[ | + | * [[4-NITROPHENYLPHOSPHATASE-RXN]] |
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
| − | {{#set: transcription-direction= | + | * [[F16BDEPHOS-RXN]] |
| − | {{#set: right-end-position= | + | ** Category: [[annotation]] |
| − | {{#set: left-end-position= | + | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a |
| − | {{#set: centisome-position= | + | ** Category: [[orthology]] |
| + | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
| + | * [[SUGAR-PHOSPHATASE-RXN]] | ||
| + | ** Category: [[annotation]] | ||
| + | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
| + | == Pathway(s) associated == | ||
| + | * [[P185-PWY]] | ||
| + | ** '''11''' reactions found over '''12''' reactions in the full pathway | ||
| + | * [[PWY66-399]] | ||
| + | ** '''11''' reactions found over '''12''' reactions in the full pathway | ||
| + | * [[SUCSYN-PWY]] | ||
| + | ** '''6''' reactions found over '''7''' reactions in the full pathway | ||
| + | * [[CALVIN-PWY]] | ||
| + | ** '''12''' reactions found over '''13''' reactions in the full pathway | ||
| + | * [[GLUCONEO-PWY]] | ||
| + | ** '''12''' reactions found over '''13''' reactions in the full pathway | ||
| + | * [[PWY-5484]] | ||
| + | ** '''10''' reactions found over '''11''' reactions in the full pathway | ||
| + | * [[GLYCOLYSIS]] | ||
| + | ** '''11''' reactions found over '''12''' reactions in the full pathway | ||
| + | {{#set: transcription-direction=negative}} | ||
| + | {{#set: right-end-position=118248}} | ||
| + | {{#set: left-end-position=102501}} | ||
| + | {{#set: centisome-position=30.633984 }} | ||
{{#set: organism associated=S.japonica_carotenoid_curated}} | {{#set: organism associated=S.japonica_carotenoid_curated}} | ||
| − | {{#set: nb reaction associated= | + | {{#set: nb reaction associated=3}} |
| + | {{#set: nb pathway associated=7}} | ||
Revision as of 14:21, 26 August 2019
Contents
Gene SJ13518
- transcription-direction:
- negative
- right-end-position:
- 118248
- left-end-position:
- 102501
- centisome-position:
- 30.633984
Organism(s) associated with this gene
Reaction(s) associated
- 4-NITROPHENYLPHOSPHATASE-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- F16BDEPHOS-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: orthology
- source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- Category: annotation
- SUGAR-PHOSPHATASE-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
Pathway(s) associated
- P185-PWY
- 11 reactions found over 12 reactions in the full pathway
- PWY66-399
- 11 reactions found over 12 reactions in the full pathway
- SUCSYN-PWY
- 6 reactions found over 7 reactions in the full pathway
- CALVIN-PWY
- 12 reactions found over 13 reactions in the full pathway
- GLUCONEO-PWY
- 12 reactions found over 13 reactions in the full pathway
- PWY-5484
- 10 reactions found over 11 reactions in the full pathway
- GLYCOLYSIS
- 11 reactions found over 12 reactions in the full pathway
