Difference between revisions of "SJ02805"

From metabolic_network
Jump to navigation Jump to search
(Created page with "Category:gene == Gene SJ04385 == * transcription-direction: ** positive * right-end-position: ** 72247 * left-end-position: ** 68570 * centisome-position: ** 63.592606...")
(Created page with "Category:gene == Gene SJ12311 == * transcription-direction: ** positive * right-end-position: ** 71323 * left-end-position: ** 62936 * centisome-position: ** 17.47863...")
Line 1: Line 1:
 
[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ04385 ==
+
== Gene SJ12311 ==
 
* transcription-direction:
 
* transcription-direction:
 
** positive
 
** positive
 
* right-end-position:
 
* right-end-position:
−
** 72247
+
** 71323
 
* left-end-position:
 
* left-end-position:
−
** 68570
+
** 62936
 
* centisome-position:
 
* centisome-position:
−
** 63.592606    
+
** 17.47863    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* [[CARBODEHYDRAT-RXN]]
−
* [[1.1.1.145-RXN]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN-12693]]
+
** Category: [[orthology]]
−
** Category: [[annotation]]
+
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
+
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
−
* [[RXN-12747]]
+
* [[RXN0-5224]]
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-12789]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN66-342]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN66-350]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN66-353]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[UDP-GLUCURONATE-4-EPIMERASE-RXN]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
−
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
+
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
−
</div>
 
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
* [[PWY-6946]]
+
* [[PWY-6142]]
−
** '''6''' reactions found over '''22''' reactions in the full pathway
+
** '''10''' reactions found over '''13''' reactions in the full pathway
−
* [[PWY-6944]]
+
* [[PWY-7115]]
−
** '''2''' reactions found over '''25''' reactions in the full pathway
+
** '''9''' reactions found over '''10''' reactions in the full pathway
−
* [[PWY-6948]]
+
* [[PWYQT-4429]]
−
** '''2''' reactions found over '''18''' reactions in the full pathway
+
** '''2''' reactions found over '''2''' reactions in the full pathway
−
* [[PWY66-378]]
+
* [[CYANCAT-PWY]]
−
** '''3''' reactions found over '''6''' reactions in the full pathway
+
** '''2''' reactions found over '''3''' reactions in the full pathway
−
* [[PWY-7299]]
+
* [[PWY-5744]]
−
** '''1''' reactions found over '''2''' reactions in the full pathway
+
** '''4''' reactions found over '''13''' reactions in the full pathway
−
* [[PWY-4861]]
+
* [[PWY-5789]]
−
** '''1''' reactions found over '''1''' reactions in the full pathway
+
** '''8''' reactions found over '''18''' reactions in the full pathway
−
* [[PWY-6415]]
+
* [[PWY-7117]]
−
** '''4''' reactions found over '''7''' reactions in the full pathway
+
** '''10''' reactions found over '''12''' reactions in the full pathway
 +
* [[PWY-5743]]
 +
** '''5''' reactions found over '''13''' reactions in the full pathway
 +
* [[PWY-241]]
 +
** '''5''' reactions found over '''6''' reactions in the full pathway
 
{{#set: transcription-direction=positive}}
 
{{#set: transcription-direction=positive}}
−
{{#set: right-end-position=72247}}
+
{{#set: right-end-position=71323}}
−
{{#set: left-end-position=68570}}
+
{{#set: left-end-position=62936}}
−
{{#set: centisome-position=63.592606   }}
+
{{#set: centisome-position=17.47863   }}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=8}}
+
{{#set: nb reaction associated=2}}
−
{{#set: nb pathway associated=7}}
+
{{#set: nb pathway associated=9}}

Revision as of 09:25, 27 August 2019

Gene SJ12311

  • transcription-direction:
    • positive
  • right-end-position:
    • 71323
  • left-end-position:
    • 62936
  • centisome-position:
    • 17.47863

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-6142
    • 10 reactions found over 13 reactions in the full pathway
  • PWY-7115
    • 9 reactions found over 10 reactions in the full pathway
  • PWYQT-4429
    • 2 reactions found over 2 reactions in the full pathway
  • CYANCAT-PWY
    • 2 reactions found over 3 reactions in the full pathway
  • PWY-5744
    • 4 reactions found over 13 reactions in the full pathway
  • PWY-5789
    • 8 reactions found over 18 reactions in the full pathway
  • PWY-7117
    • 10 reactions found over 12 reactions in the full pathway
  • PWY-5743
    • 5 reactions found over 13 reactions in the full pathway
  • PWY-241
    • 5 reactions found over 6 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ02805&oldid=29765"