Difference between revisions of "SJ02805"

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(Created page with "Category:gene == Gene SJ16362 == * transcription-direction: ** positive * right-end-position: ** 259294 * left-end-position: ** 226821 * centisome-position: ** 79.79322...")
(Created page with "Category:gene == Gene SJ01312 == * transcription-direction: ** negative * right-end-position: ** 485530 * left-end-position: ** 446726 * centisome-position: ** 80.86533...")
Line 1: Line 1:
 
[[Category:gene]]
 
[[Category:gene]]
== Gene SJ16362 ==
+
== Gene SJ01312 ==
 
* transcription-direction:
 
* transcription-direction:
** positive
+
** negative
 
* right-end-position:
 
* right-end-position:
** 259294
+
** 485530
 
* left-end-position:
 
* left-end-position:
** 226821
+
** 446726
 
* centisome-position:
 
* centisome-position:
** 79.79322    
+
** 80.86533    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* [[ADENYLATECYC-RXN]]
* [[3.1.1.64-RXN]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* [[CARBOXYLESTERASE-RXN]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* [[GLUTAMINE--TRNA-LIGASE-RXN]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* [[LEUCINE--TRNA-LIGASE-RXN]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[GUANYLCYC-RXN]]
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
* [[RETINYL-PALMITATE-ESTERASE-RXN]]
+
{{#set: transcription-direction=negative}}
** Category: [[annotation]]
+
{{#set: right-end-position=485530}}
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
+
{{#set: left-end-position=446726}}
* [[RXN-10711]]
+
{{#set: centisome-position=80.86533   }}
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* [[RXN-10767]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* [[RXN-12252]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* [[RXN-12575]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* [[RXNQT-4366]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* [[VALINE--TRNA-LIGASE-RXN]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
</div>
 
== Pathway(s) associated ==
 
* [[TRNA-CHARGING-PWY]]
 
** '''21''' reactions found over '''21''' reactions in the full pathway
 
* [[PWY-6303]]
 
** '''1''' reactions found over '''2''' reactions in the full pathway
 
* [[PWY-6857]]
 
** '''3''' reactions found over '''7''' reactions in the full pathway
 
{{#set: transcription-direction=positive}}
 
{{#set: right-end-position=259294}}
 
{{#set: left-end-position=226821}}
 
{{#set: centisome-position=79.79322   }}
 
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
{{#set: nb reaction associated=11}}
+
{{#set: nb reaction associated=2}}
{{#set: nb pathway associated=3}}
 

Revision as of 18:46, 14 January 2021

Gene SJ01312

  • transcription-direction:
    • negative
  • right-end-position:
    • 485530
  • left-end-position:
    • 446726
  • centisome-position:
    • 80.86533

Organism(s) associated with this gene

Reaction(s) associated