Difference between revisions of "SJ02846"

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(Created page with "Category:gene == Gene SJ07241 == * transcription-direction: ** negative * right-end-position: ** 1235692 * left-end-position: ** 1229445 * centisome-position: ** 84.146545...")
(Created page with "Category:gene == Gene SJ02846 == * transcription-direction: ** negative * right-end-position: ** 434950 * left-end-position: ** 431511 * centisome-position: ** 80.95421...")
 
Line 1: Line 1:
 
[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ07241 ==
+
== Gene SJ02846 ==
 
* transcription-direction:
 
* transcription-direction:
 
** negative
 
** negative
 
* right-end-position:
 
* right-end-position:
−
** 1235692
+
** 434950
 
* left-end-position:
 
* left-end-position:
−
** 1229445
+
** 431511
 
* centisome-position:
 
* centisome-position:
−
** 84.146545    
+
** 80.95421    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* [[BIS5-ADENOSYL-TRIPHOSPHATASE-RXN]]
−
* [[ACOA40OR]]
 
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
−
* [[ACYLCOADEHYDROG-RXN]]
+
* [[OMEGA-AMIDASE-RXN]]
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[IVCDH]]
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
−
* [[LONG-CHAIN-FATTY-ACYL-COA-REDUCTASE-RXN]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[MCDH]]
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
−
* [[MCDH_LPAREN_2mb2coa_RPAREN_]]
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
−
* [[RXN-12558]]
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
−
* [[RXN-14264]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-1404]]
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
−
* [[RXN0-2301]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
</div>
 
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
* [[FAO-PWY]]
+
* [[PWY-581]]
−
** '''6''' reactions found over '''7''' reactions in the full pathway
+
** '''5''' reactions found over '''12''' reactions in the full pathway
−
* [[PWY-6863]]
+
* [[PWYQT-4476]]
−
** '''9''' reactions found over '''11''' reactions in the full pathway
+
** '''1''' reactions found over '''13''' reactions in the full pathway
−
* [[PWY-6883]]
+
* [[PWY-5026]]
−
** '''5''' reactions found over '''6''' reactions in the full pathway
+
** '''1''' reactions found over '''1''' reactions in the full pathway
−
* [[LEU-DEG2-PWY]]
 
−
** '''4''' reactions found over '''6''' reactions in the full pathway
 
 
{{#set: transcription-direction=negative}}
 
{{#set: transcription-direction=negative}}
−
{{#set: right-end-position=1235692}}
+
{{#set: right-end-position=434950}}
−
{{#set: left-end-position=1229445}}
+
{{#set: left-end-position=431511}}
−
{{#set: centisome-position=84.146545   }}
+
{{#set: centisome-position=80.95421   }}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=9}}
+
{{#set: nb reaction associated=3}}
−
{{#set: nb pathway associated=4}}
+
{{#set: nb pathway associated=3}}

Latest revision as of 11:10, 18 March 2021

Gene SJ02846

  • transcription-direction:
    • negative
  • right-end-position:
    • 434950
  • left-end-position:
    • 431511
  • centisome-position:
    • 80.95421

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-581
    • 5 reactions found over 12 reactions in the full pathway
  • PWYQT-4476
    • 1 reactions found over 13 reactions in the full pathway
  • PWY-5026
    • 1 reactions found over 1 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ02846&oldid=136533"