Difference between revisions of "SJ02871"

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(Created page with "Category:gene == Gene SJ08066 == * transcription-direction: ** negative * right-end-position: ** 27668 * left-end-position: ** 7570 * centisome-position: ** 12.943933...")
(Created page with "Category:gene == Gene SJ16004 == * transcription-direction: ** positive * right-end-position: ** 135593 * left-end-position: ** 117211 * centisome-position: ** 16.949837...")
Line 1: Line 1:
 
[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ08066 ==
+
== Gene SJ16004 ==
 
* transcription-direction:
 
* transcription-direction:
−
** negative
+
** positive
 
* right-end-position:
 
* right-end-position:
−
** 27668
+
** 135593
 
* left-end-position:
 
* left-end-position:
−
** 7570
+
** 117211
 
* centisome-position:
 
* centisome-position:
−
** 12.943933    
+
** 16.949837    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[4.3.1.17-RXN]]
+
* [[5.3.4.1-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
** Category: [[orthology]]
+
* [[DISULISOM-RXN]]
−
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
−
* [[RXN-15122]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
** Category: [[orthology]]
+
{{#set: transcription-direction=positive}}
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
+
{{#set: right-end-position=135593}}
−
* [[RXN-15125]]
+
{{#set: left-end-position=117211}}
−
** Category: [[annotation]]
+
{{#set: centisome-position=16.949837   }}
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[THREDEHYD-RXN]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
== Pathway(s) associated ==
 
−
* [[ILEUSYN-PWY]]
 
−
** '''4''' reactions found over '''7''' reactions in the full pathway
 
−
* [[PWY-5437]]
 
−
** '''1''' reactions found over '''6''' reactions in the full pathway
 
−
* [[PWY-5826]]
 
−
** '''2''' reactions found over '''14''' reactions in the full pathway
 
−
* [[SERDEG-PWY]]
 
−
** '''1''' reactions found over '''3''' reactions in the full pathway
 
−
* [[PWY-5497]]
 
−
** '''10''' reactions found over '''24''' reactions in the full pathway
 
−
* [[PWY-3661]]
 
−
** '''3''' reactions found over '''7''' reactions in the full pathway
 
−
* [[PWY66-428]]
 
−
** '''2''' reactions found over '''2''' reactions in the full pathway
 
−
{{#set: transcription-direction=negative}}
 
−
{{#set: right-end-position=27668}}
 
−
{{#set: left-end-position=7570}}
 
−
{{#set: centisome-position=12.943933   }}
 
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=4}}
+
{{#set: nb reaction associated=2}}
−
{{#set: nb pathway associated=7}}
 

Revision as of 09:25, 27 August 2019

Gene SJ16004

  • transcription-direction:
    • positive
  • right-end-position:
    • 135593
  • left-end-position:
    • 117211
  • centisome-position:
    • 16.949837

Organism(s) associated with this gene

Reaction(s) associated




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ02871&oldid=29998"