Difference between revisions of "SJ02880"

From metabolic_network
Jump to navigation Jump to search
(Created page with "Category:gene == Gene SJ00348 == * transcription-direction: ** positive * right-end-position: ** 62269 * left-end-position: ** 57108 * centisome-position: ** 33.94376...")
(Created page with "Category:gene == Gene SJ02880 == * transcription-direction: ** positive * right-end-position: ** 72520 * left-end-position: ** 50563 * centisome-position: ** 38.7878 =...")
 
(4 intermediate revisions by 2 users not shown)
Line 1: Line 1:
 
[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ00348 ==
+
== Gene SJ02880 ==
 
* transcription-direction:
 
* transcription-direction:
 
** positive
 
** positive
 
* right-end-position:
 
* right-end-position:
−
** 62269
+
** 72520
 
* left-end-position:
 
* left-end-position:
−
** 57108
+
** 50563
 
* centisome-position:
 
* centisome-position:
−
** 33.94376    
+
** 38.7878    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[GAPDHSYNEC-RXN]]
+
* [[AMINO-CARBOXYMUCONATE-SEMIALDEHYDE-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[GAPOXNPHOSPHN-RXN]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
* [[RXN-15115]]
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* [[PWY-5654]]
−
* [[GLUCONEO-PWY]]
+
** '''1''' reactions found over '''4''' reactions in the full pathway
−
** '''12''' reactions found over '''13''' reactions in the full pathway
+
* [[PWY-5652]]
−
* [[P124-PWY]]
+
** '''2''' reactions found over '''5''' reactions in the full pathway
−
** '''12''' reactions found over '''15''' reactions in the full pathway
+
* [[PWY-5647]]
−
* [[P185-PWY]]
+
** '''2''' reactions found over '''6''' reactions in the full pathway
−
** '''11''' reactions found over '''12''' reactions in the full pathway
 
−
* [[P122-PWY]]
 
−
** '''16''' reactions found over '''18''' reactions in the full pathway
 
−
* [[PWY-5484]]
 
−
** '''10''' reactions found over '''11''' reactions in the full pathway
 
−
* [[PWY-1042]]
 
−
** '''9''' reactions found over '''10''' reactions in the full pathway
 
−
* [[GLYCOLYSIS]]
 
−
** '''11''' reactions found over '''12''' reactions in the full pathway
 
−
* [[ANAGLYCOLYSIS-PWY]]
 
−
** '''10''' reactions found over '''11''' reactions in the full pathway
 
−
* [[SUCSYN-PWY]]
 
−
** '''6''' reactions found over '''7''' reactions in the full pathway
 
−
* [[PWY66-399]]
 
−
** '''11''' reactions found over '''12''' reactions in the full pathway
 
−
* [[PWY-6901]]
 
−
** '''10''' reactions found over '''8''' reactions in the full pathway
 
−
* [[PWY-7003]]
 
−
** '''8''' reactions found over '''6''' reactions in the full pathway
 
−
</div>
 
 
{{#set: transcription-direction=positive}}
 
{{#set: transcription-direction=positive}}
−
{{#set: right-end-position=62269}}
+
{{#set: right-end-position=72520}}
−
{{#set: left-end-position=57108}}
+
{{#set: left-end-position=50563}}
−
{{#set: centisome-position=33.94376   }}
+
{{#set: centisome-position=38.7878   }}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=3}}
+
{{#set: nb reaction associated=1}}
−
{{#set: nb pathway associated=12}}
+
{{#set: nb pathway associated=3}}

Latest revision as of 11:01, 18 March 2021

Gene SJ02880

  • transcription-direction:
    • positive
  • right-end-position:
    • 72520
  • left-end-position:
    • 50563
  • centisome-position:
    • 38.7878

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-5654
    • 1 reactions found over 4 reactions in the full pathway
  • PWY-5652
    • 2 reactions found over 5 reactions in the full pathway
  • PWY-5647
    • 2 reactions found over 6 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ02880&oldid=131980"