Difference between revisions of "SJ02907"

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(Created page with "Category:gene == Gene SJ21137 == * transcription-direction: ** positive * right-end-position: ** 102517 * left-end-position: ** 93688 * centisome-position: ** 47.323383...")
(Created page with "Category:gene == Gene SJ02907 == * transcription-direction: ** negative * right-end-position: ** 171775 * left-end-position: ** 143572 * centisome-position: ** 27.03351...")
 
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[[Category:gene]]
 
[[Category:gene]]
== Gene SJ21137 ==
+
== Gene SJ02907 ==
 
* transcription-direction:
 
* transcription-direction:
** positive
+
** negative
 
* right-end-position:
 
* right-end-position:
** 102517
+
** 171775
 
* left-end-position:
 
* left-end-position:
** 93688
+
** 143572
 
* centisome-position:
 
* centisome-position:
** 47.323383    
+
** 27.03351    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* [[ALANINE--TRNA-LIGASE-RXN]]
* [[1.1.1.145-RXN]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
* [[NADH-DEHYDROGENASE-RXN]]
+
** Category: [[orthology]]
** Category: [[annotation]]
+
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* [[RXN-12693]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* [[RXN-12747]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* [[RXN-12789]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* [[RXN66-342]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* [[RXN66-350]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* [[RXN66-353]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
</div>
 
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
* [[PWY-6946]]
+
* [[TRNA-CHARGING-PWY]]
** '''6''' reactions found over '''22''' reactions in the full pathway
+
** '''21''' reactions found over '''21''' reactions in the full pathway
* [[PWY-6944]]
+
{{#set: transcription-direction=negative}}
** '''2''' reactions found over '''25''' reactions in the full pathway
+
{{#set: right-end-position=171775}}
* [[PWY-6948]]
+
{{#set: left-end-position=143572}}
** '''2''' reactions found over '''18''' reactions in the full pathway
+
{{#set: centisome-position=27.03351   }}
* [[PWY66-378]]
 
** '''3''' reactions found over '''6''' reactions in the full pathway
 
* [[PWY-7299]]
 
** '''1''' reactions found over '''2''' reactions in the full pathway
 
{{#set: transcription-direction=positive}}
 
{{#set: right-end-position=102517}}
 
{{#set: left-end-position=93688}}
 
{{#set: centisome-position=47.323383   }}
 
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
{{#set: nb reaction associated=8}}
+
{{#set: nb reaction associated=1}}
{{#set: nb pathway associated=5}}
+
{{#set: nb pathway associated=1}}

Latest revision as of 11:02, 18 March 2021

Gene SJ02907

  • transcription-direction:
    • negative
  • right-end-position:
    • 171775
  • left-end-position:
    • 143572
  • centisome-position:
    • 27.03351

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated