Difference between revisions of "SJ02910"

From metabolic_network
Jump to navigation Jump to search
(Created page with "Category:gene == Gene SJ16634 == * transcription-direction: ** negative * right-end-position: ** 189331 * left-end-position: ** 170828 * centisome-position: ** 61.298763...")
(Created page with "Category:gene == Gene SJ02910 == * transcription-direction: ** positive * right-end-position: ** 195815 * left-end-position: ** 180581 * centisome-position: ** 34.00202...")
 
(5 intermediate revisions by 3 users not shown)
Line 1: Line 1:
 
[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ16634 ==
+
== Gene SJ02910 ==
 
* transcription-direction:
 
* transcription-direction:
−
** negative
+
** positive
 
* right-end-position:
 
* right-end-position:
−
** 189331
+
** 195815
 
* left-end-position:
 
* left-end-position:
−
** 170828
+
** 180581
 
* centisome-position:
 
* centisome-position:
−
** 61.298763    
+
** 34.00202    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[ARACHIDONATE-5-LIPOXYGENASE-RXN]]
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 +
* [[2.7.8.15-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN-1321]]
 
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
−
* [[RXN-13395]]
+
* [[2.7.8.17-RXN]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[PHOSNACMURPENTATRANS-RXN]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[RXN-11347]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN-8497]]
 
 
** Category: [[orthology]]
 
** Category: [[orthology]]
−
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
−
* [[RXN-8647]]
+
* [[RXN-8975]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
</div>
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
* [[PWY66-375]]
+
* [[MANNOSYL-CHITO-DOLICHOL-BIOSYNTHESIS]]
−
** '''5''' reactions found over '''6''' reactions in the full pathway
+
** '''16''' reactions found over '''19''' reactions in the full pathway
−
* [[PWY-5410]]
+
* [[PEPTIDOGLYCANSYN-PWY]]
 +
** '''2''' reactions found over '''2''' reactions in the full pathway
 +
* [[PWY-6470]]
 
** '''2''' reactions found over '''9''' reactions in the full pathway
 
** '''2''' reactions found over '''9''' reactions in the full pathway
−
* [[PWY-735]]
+
* [[PWY-6471]]
−
** '''16''' reactions found over '''19''' reactions in the full pathway
+
** '''2''' reactions found over '''6''' reactions in the full pathway
−
* [[PWY66-392]]
+
* [[PWY-5265]]
−
** '''1''' reactions found over '''11''' reactions in the full pathway
+
** '''2''' reactions found over '''6''' reactions in the full pathway
−
* [[PWY-6917]]
+
{{#set: transcription-direction=positive}}
−
** '''2''' reactions found over '''3''' reactions in the full pathway
+
{{#set: right-end-position=195815}}
−
* [[PWY-5406]]
+
{{#set: left-end-position=180581}}
−
** '''1''' reactions found over '''4''' reactions in the full pathway
+
{{#set: centisome-position=34.00202   }}
−
* [[PWY-5407]]
 
−
** '''1''' reactions found over '''5''' reactions in the full pathway
 
−
* [[PWY-5408]]
 
−
** '''1''' reactions found over '''4''' reactions in the full pathway
 
−
{{#set: transcription-direction=negative}}
 
−
{{#set: right-end-position=189331}}
 
−
{{#set: left-end-position=170828}}
 
−
{{#set: centisome-position=61.298763   }}
 
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: nb reaction associated=5}}
 
{{#set: nb reaction associated=5}}
−
{{#set: nb pathway associated=8}}
+
{{#set: nb pathway associated=5}}

Latest revision as of 11:08, 18 March 2021

Gene SJ02910

  • transcription-direction:
    • positive
  • right-end-position:
    • 195815
  • left-end-position:
    • 180581
  • centisome-position:
    • 34.00202

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ02910&oldid=135349"