Difference between revisions of "SJ02954"
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(Created page with "Category:gene == Gene SJ06498 == * transcription-direction: ** positive * right-end-position: ** 31124 * left-end-position: ** 21980 * centisome-position: ** 27.97826...") |
(Created page with "Category:gene == Gene SJ22394 == * transcription-direction: ** positive * right-end-position: ** 122264 * left-end-position: ** 111621 * centisome-position: ** 62.958492...") |
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| Line 1: | Line 1: | ||
[[Category:gene]] | [[Category:gene]] | ||
| − | == Gene | + | == Gene SJ22394 == |
* transcription-direction: | * transcription-direction: | ||
** positive | ** positive | ||
* right-end-position: | * right-end-position: | ||
| − | ** | + | ** 122264 |
* left-end-position: | * left-end-position: | ||
| − | ** | + | ** 111621 |
* centisome-position: | * centisome-position: | ||
| − | ** | + | ** 62.958492 |
== Organism(s) associated with this gene == | == Organism(s) associated with this gene == | ||
* [[S.japonica_carotenoid_curated]] | * [[S.japonica_carotenoid_curated]] | ||
== Reaction(s) associated == | == Reaction(s) associated == | ||
| − | * [[RXN | + | * [[ACETYLORNDEACET-RXN]] |
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
** Category: [[orthology]] | ** Category: [[orthology]] | ||
| + | *** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a | ||
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
| − | * [[ | + | * [[AODAA]] |
| + | ** Category: [[orthology]] | ||
| + | *** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a | ||
| + | * [[RXN-7933]] | ||
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
| − | |||
| − | |||
== Pathway(s) associated == | == Pathway(s) associated == | ||
| − | * [[PWY- | + | * [[GLUTORN-PWY]] |
| − | ** ''' | + | ** '''5''' reactions found over '''5''' reactions in the full pathway |
| + | * [[PWY-5154]] | ||
| + | ** '''8''' reactions found over '''9''' reactions in the full pathway | ||
{{#set: transcription-direction=positive}} | {{#set: transcription-direction=positive}} | ||
| − | {{#set: right-end-position= | + | {{#set: right-end-position=122264}} |
| − | {{#set: left-end-position= | + | {{#set: left-end-position=111621}} |
| − | {{#set: centisome-position= | + | {{#set: centisome-position=62.958492 }} |
{{#set: organism associated=S.japonica_carotenoid_curated}} | {{#set: organism associated=S.japonica_carotenoid_curated}} | ||
| − | {{#set: nb reaction associated= | + | {{#set: nb reaction associated=3}} |
| − | {{#set: nb pathway associated= | + | {{#set: nb pathway associated=2}} |
Revision as of 14:20, 26 August 2019
Contents
Gene SJ22394
- transcription-direction:
- positive
- right-end-position:
- 122264
- left-end-position:
- 111621
- centisome-position:
- 62.958492
Organism(s) associated with this gene
Reaction(s) associated
- ACETYLORNDEACET-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: orthology
- source: output_pantograph_arabidopsis_thaliana; tool: pantograph; comment: n.a
- source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- Category: annotation
- AODAA
- Category: orthology
- source: output_pantograph_nannochloropsis_salina; tool: pantograph; comment: n.a
- Category: orthology
- RXN-7933
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
Pathway(s) associated
- GLUTORN-PWY
- 5 reactions found over 5 reactions in the full pathway
- PWY-5154
- 8 reactions found over 9 reactions in the full pathway
