Difference between revisions of "SJ03029"

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(Created page with "Category:gene == Gene SJ21017 == * transcription-direction: ** negative * right-end-position: ** 194577 * left-end-position: ** 189532 * centisome-position: ** 94.19284...")
(Created page with "Category:gene == Gene SJ03029 == * transcription-direction: ** positive * right-end-position: ** 119013 * left-end-position: ** 97353 * centisome-position: ** 77.32013...")
 
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[[Category:gene]]
 
[[Category:gene]]
== Gene SJ21017 ==
+
== Gene SJ03029 ==
 
* transcription-direction:
 
* transcription-direction:
** negative
+
** positive
 
* right-end-position:
 
* right-end-position:
** 194577
+
** 119013
 
* left-end-position:
 
* left-end-position:
** 189532
+
** 97353
 
* centisome-position:
 
* centisome-position:
** 94.19284    
+
** 77.32013    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
* [[NADH-DEHYDROG-A-RXN]]
+
* [[PROTEIN-KINASE-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-8443]]
 
** Category: [[orthology]]
 
** Category: [[orthology]]
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
+
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
* [[NADH-DEHYDROGENASE-QUINONE-RXN]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* [[NADH-DEHYDROGENASE-RXN]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
** Category: [[orthology]]
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* [[RXN0-5330]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
** Category: [[orthology]]
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* [[PWY-5381]]
* [[PWY0-1335]]
+
** '''6''' reactions found over '''11''' reactions in the full pathway
** '''1''' reactions found over '''2''' reactions in the full pathway
+
{{#set: transcription-direction=positive}}
* [[PWY-4302]]
+
{{#set: right-end-position=119013}}
** '''3''' reactions found over '''3''' reactions in the full pathway
+
{{#set: left-end-position=97353}}
* [[PWY-3781]]
+
{{#set: centisome-position=77.32013   }}
** '''4''' reactions found over '''4''' reactions in the full pathway
 
* [[PWY0-1334]]
 
** '''1''' reactions found over '''2''' reactions in the full pathway
 
* [[PWY-6692]]
 
** '''3''' reactions found over '''6''' reactions in the full pathway
 
* [[PWY-5083]]
 
** '''5''' reactions found over '''6''' reactions in the full pathway
 
* [[PWY-7279]]
 
** '''4''' reactions found over '''4''' reactions in the full pathway
 
* [[PWY0-1573]]
 
** '''1''' reactions found over '''2''' reactions in the full pathway
 
* [[PWY-7269]]
 
** '''5''' reactions found over '''5''' reactions in the full pathway
 
* [[PWY0-1568]]
 
** '''1''' reactions found over '''2''' reactions in the full pathway
 
* [[PWY0-1567]]
 
** '''1''' reactions found over '''2''' reactions in the full pathway
 
</div>
 
{{#set: transcription-direction=negative}}
 
{{#set: right-end-position=194577}}
 
{{#set: left-end-position=189532}}
 
{{#set: centisome-position=94.19284   }}
 
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
{{#set: nb reaction associated=4}}
+
{{#set: nb reaction associated=2}}
{{#set: nb pathway associated=11}}
+
{{#set: nb pathway associated=1}}

Latest revision as of 11:05, 18 March 2021

Gene SJ03029

  • transcription-direction:
    • positive
  • right-end-position:
    • 119013
  • left-end-position:
    • 97353
  • centisome-position:
    • 77.32013

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-5381
    • 6 reactions found over 11 reactions in the full pathway