Difference between revisions of "SJ03056"

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(Created page with "Category:gene == Gene SJ05465 == * transcription-direction: ** negative * right-end-position: ** 135141 * left-end-position: ** 122926 * centisome-position: ** 24.809578...")
 
(Created page with "Category:gene == Gene SJ11594 == * transcription-direction: ** positive * right-end-position: ** 247448 * left-end-position: ** 234297 * centisome-position: ** 63.308628...")
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[[Category:gene]]
 
[[Category:gene]]
== Gene SJ05465 ==
+
== Gene SJ11594 ==
 
* transcription-direction:
 
* transcription-direction:
** negative
+
** positive
 
* right-end-position:
 
* right-end-position:
** 135141
+
** 247448
 
* left-end-position:
 
* left-end-position:
** 122926
+
** 234297
 
* centisome-position:
 
* centisome-position:
** 24.809578    
+
** 63.308628    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* [[GLYCEROL-KIN-RXN]]
* [[2.7.11.18-RXN]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
* [[ATPASE-RXN]]
+
** Category: [[orthology]]
** Category: [[annotation]]
+
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
+
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
* [[NUCLEOSIDE-TRIPHOSPHATASE-RXN]]
+
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* [[PROTEIN-KINASE-RXN]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* [[RXN-12195]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* [[RXN-12196]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* [[RXN0-5462]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
</div>
 
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
* [[PWY-7210]]
+
* [[PWY-4261]]
** '''8''' reactions found over '''8''' reactions in the full pathway
+
** '''2''' reactions found over '''2''' reactions in the full pathway
* [[PWY-7198]]
+
{{#set: transcription-direction=positive}}
** '''6''' reactions found over '''7''' reactions in the full pathway
+
{{#set: right-end-position=247448}}
* [[PWY-7184]]
+
{{#set: left-end-position=234297}}
** '''9''' reactions found over '''9''' reactions in the full pathway
+
{{#set: centisome-position=63.308628   }}
* [[PWY-6545]]
 
** '''8''' reactions found over '''9''' reactions in the full pathway
 
{{#set: transcription-direction=negative}}
 
{{#set: right-end-position=135141}}
 
{{#set: left-end-position=122926}}
 
{{#set: centisome-position=24.809578   }}
 
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
{{#set: nb reaction associated=7}}
+
{{#set: nb reaction associated=1}}
{{#set: nb pathway associated=4}}
+
{{#set: nb pathway associated=1}}

Revision as of 14:21, 26 August 2019

Gene SJ11594

  • transcription-direction:
    • positive
  • right-end-position:
    • 247448
  • left-end-position:
    • 234297
  • centisome-position:
    • 63.308628

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-4261
    • 2 reactions found over 2 reactions in the full pathway