Difference between revisions of "SJ03118"
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(Created page with "Category:gene == Gene SJ22514 == * transcription-direction: ** positive * right-end-position: ** 60543 * left-end-position: ** 42063 * centisome-position: ** 23.95428...") |
(Created page with "Category:gene == Gene SJ07700 == * transcription-direction: ** negative * right-end-position: ** 15588 * left-end-position: ** 14863 * centisome-position: ** 23.65251...") |
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| Line 1: | Line 1: | ||
[[Category:gene]] | [[Category:gene]] | ||
| − | == Gene | + | == Gene SJ07700 == |
* transcription-direction: | * transcription-direction: | ||
| − | ** | + | ** negative |
* right-end-position: | * right-end-position: | ||
| − | ** | + | ** 15588 |
* left-end-position: | * left-end-position: | ||
| − | ** | + | ** 14863 |
* centisome-position: | * centisome-position: | ||
| − | ** 23. | + | ** 23.65251 |
== Organism(s) associated with this gene == | == Organism(s) associated with this gene == | ||
* [[S.japonica_carotenoid_curated]] | * [[S.japonica_carotenoid_curated]] | ||
== Reaction(s) associated == | == Reaction(s) associated == | ||
| − | * [[ | + | * [[CHORISMATEMUT-RXN]] |
| − | |||
| − | |||
| − | |||
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
** Category: [[orthology]] | ** Category: [[orthology]] | ||
| − | |||
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a | *** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a | ||
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a | *** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a | ||
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
== Pathway(s) associated == | == Pathway(s) associated == | ||
| − | * [[PWY- | + | * [[PWY-3462]] |
| − | ** ''' | + | ** '''2''' reactions found over '''3''' reactions in the full pathway |
| − | * [[PWY- | + | * [[TYRSYN]] |
| − | ** ''' | + | ** '''3''' reactions found over '''3''' reactions in the full pathway |
| − | * [[PWY- | + | * [[PWY-6627]] |
| − | ** ''' | + | ** '''3''' reactions found over '''15''' reactions in the full pathway |
| − | {{#set: transcription-direction= | + | * [[PWY-3461]] |
| − | {{#set: right-end-position= | + | ** '''3''' reactions found over '''3''' reactions in the full pathway |
| − | {{#set: left-end-position= | + | * [[PWY-6120]] |
| − | {{#set: centisome-position=23. | + | ** '''2''' reactions found over '''3''' reactions in the full pathway |
| + | * [[PHESYN]] | ||
| + | ** '''3''' reactions found over '''3''' reactions in the full pathway | ||
| + | * [[PWY-7626]] | ||
| + | ** '''1''' reactions found over '''10''' reactions in the full pathway | ||
| + | {{#set: transcription-direction=negative}} | ||
| + | {{#set: right-end-position=15588}} | ||
| + | {{#set: left-end-position=14863}} | ||
| + | {{#set: centisome-position=23.65251 }} | ||
{{#set: organism associated=S.japonica_carotenoid_curated}} | {{#set: organism associated=S.japonica_carotenoid_curated}} | ||
| − | {{#set: nb reaction associated= | + | {{#set: nb reaction associated=1}} |
| − | {{#set: nb pathway associated= | + | {{#set: nb pathway associated=7}} |
Revision as of 09:25, 27 August 2019
Contents
Gene SJ07700
- transcription-direction:
- negative
- right-end-position:
- 15588
- left-end-position:
- 14863
- centisome-position:
- 23.65251
Organism(s) associated with this gene
Reaction(s) associated
- CHORISMATEMUT-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: orthology
- source: output_pantograph_nannochloropsis_salina; tool: pantograph; comment: n.a
- source: output_pantograph_arabidopsis_thaliana; tool: pantograph; comment: n.a
- source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- Category: annotation
Pathway(s) associated
- PWY-3462
- 2 reactions found over 3 reactions in the full pathway
- TYRSYN
- 3 reactions found over 3 reactions in the full pathway
- PWY-6627
- 3 reactions found over 15 reactions in the full pathway
- PWY-3461
- 3 reactions found over 3 reactions in the full pathway
- PWY-6120
- 2 reactions found over 3 reactions in the full pathway
- PHESYN
- 3 reactions found over 3 reactions in the full pathway
- PWY-7626
- 1 reactions found over 10 reactions in the full pathway
