Difference between revisions of "SJ03124"

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(Created page with "Category:gene == Gene SJ16156 == == Organism(s) associated with this gene == * S.japonica_carotenoid_curated == Reaction(s) associated == * 3PGAREARR-RXN ** Categ...")
(Created page with "Category:gene == Gene SJ01354 == * transcription-direction: ** negative * right-end-position: ** 44687 * left-end-position: ** 27866 * centisome-position: ** 18.307842...")
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[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ16156 ==
+
== Gene SJ01354 ==
 +
* transcription-direction:
 +
** negative
 +
* right-end-position:
 +
** 44687
 +
* left-end-position:
 +
** 27866
 +
* centisome-position:
 +
** 18.307842   
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[3PGAREARR-RXN]]
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
−
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
−
== Pathway(s) associated ==
 
 
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
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* [[PWY-6142]]
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* [[3.1.1.64-RXN]]
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** '''10''' reactions found over '''13''' reactions in the full pathway
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** Category: [[annotation]]
−
* [[PWY-7003]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
** '''8''' reactions found over '''6''' reactions in the full pathway
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* [[CARBOXYLESTERASE-RXN]]
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* [[PWY-7218]]
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** Category: [[annotation]]
−
** '''7''' reactions found over '''4''' reactions in the full pathway
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[GLYCOLYSIS]]
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* [[RETINYL-PALMITATE-ESTERASE-RXN]]
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** '''11''' reactions found over '''12''' reactions in the full pathway
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** Category: [[annotation]]
−
* [[P341-PWY]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
** '''6''' reactions found over '''10''' reactions in the full pathway
+
* [[RXN-10711]]
−
* [[PWY-5723]]
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** Category: [[annotation]]
−
** '''10''' reactions found over '''10''' reactions in the full pathway
+
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[P124-PWY]]
+
* [[RXN-10767]]
−
** '''12''' reactions found over '''15''' reactions in the full pathway
+
** Category: [[annotation]]
−
* [[PWY-2221]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
** '''6''' reactions found over '''9''' reactions in the full pathway
+
* [[RXN-12252]]
−
* [[PWY-5484]]
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** Category: [[annotation]]
−
** '''10''' reactions found over '''11''' reactions in the full pathway
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[PWY-1042]]
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* [[RXN-12575]]
−
** '''9''' reactions found over '''10''' reactions in the full pathway
+
** Category: [[annotation]]
−
* [[PWY-6886]]
+
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
** '''8''' reactions found over '''5''' reactions in the full pathway
+
* [[RXNQT-4366]]
−
* [[PWY-6901]]
+
** Category: [[annotation]]
−
** '''10''' reactions found over '''8''' reactions in the full pathway
+
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[PWY-7124]]
 
−
** '''8''' reactions found over '''8''' reactions in the full pathway
 
−
* [[GLUCONEO-PWY]]
 
−
** '''12''' reactions found over '''13''' reactions in the full pathway
 
 
</div>
 
</div>
 +
== Pathway(s) associated ==
 +
* [[PWY-6303]]
 +
** '''1''' reactions found over '''2''' reactions in the full pathway
 +
* [[PWY-6857]]
 +
** '''3''' reactions found over '''7''' reactions in the full pathway
 +
{{#set: transcription-direction=negative}}
 +
{{#set: right-end-position=44687}}
 +
{{#set: left-end-position=27866}}
 +
{{#set: centisome-position=18.307842    }}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=1}}
+
{{#set: nb reaction associated=8}}
−
{{#set: nb pathway associated=14}}
+
{{#set: nb pathway associated=2}}

Revision as of 15:24, 5 January 2021

Gene SJ01354

  • transcription-direction:
    • negative
  • right-end-position:
    • 44687
  • left-end-position:
    • 27866
  • centisome-position:
    • 18.307842

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-6303
    • 1 reactions found over 2 reactions in the full pathway
  • PWY-6857
    • 3 reactions found over 7 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ03124&oldid=71232"