Difference between revisions of "SJ03147"

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(Created page with "Category:gene == Gene SJ20134 == * transcription-direction: ** negative * right-end-position: ** 133057 * left-end-position: ** 129266 * centisome-position: ** 60.866005...")
(Created page with "Category:gene == Gene SJ09890 == * transcription-direction: ** positive * right-end-position: ** 61381 * left-end-position: ** 33959 * centisome-position: ** 8.395822...")
Line 1: Line 1:
 
[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ20134 ==
+
== Gene SJ09890 ==
 
* transcription-direction:
 
* transcription-direction:
−
** negative
+
** positive
 
* right-end-position:
 
* right-end-position:
−
** 133057
+
** 61381
 
* left-end-position:
 
* left-end-position:
−
** 129266
+
** 33959
 
* centisome-position:
 
* centisome-position:
−
** 60.866005    
+
** 8.395822    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[DNA-DIRECTED-RNA-POLYMERASE-RXN]]
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 +
* [[ADENYLYLSULFKIN-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
{{#set: transcription-direction=negative}}
+
* [[INORGPYROPHOSPHAT-RXN]]
−
{{#set: right-end-position=133057}}
+
** Category: [[annotation]]
−
{{#set: left-end-position=129266}}
+
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
{{#set: centisome-position=60.866005   }}
+
** Category: [[orthology]]
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[RXN-12720]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[SULFATE-ADENYLYLTRANS-RXN]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
</div>
 +
== Pathway(s) associated ==
 +
* [[PWY-5340]]
 +
** '''2''' reactions found over '''2''' reactions in the full pathway
 +
* [[PWY-7805]]
 +
** '''2''' reactions found over '''8''' reactions in the full pathway
 +
* [[PWY-7807]]
 +
** '''2''' reactions found over '''7''' reactions in the full pathway
 +
* [[PWY-6932]]
 +
** '''1''' reactions found over '''5''' reactions in the full pathway
 +
* [[DISSULFRED-PWY]]
 +
** '''2''' reactions found over '''4''' reactions in the full pathway
 +
* [[P224-PWY]]
 +
** '''2''' reactions found over '''5''' reactions in the full pathway
 +
* [[PWY-6683]]
 +
** '''3''' reactions found over '''3''' reactions in the full pathway
 +
* [[SULFMETII-PWY]]
 +
** '''3''' reactions found over '''3''' reactions in the full pathway
 +
* [[PWY-5278]]
 +
** '''2''' reactions found over '''2''' reactions in the full pathway
 +
{{#set: transcription-direction=positive}}
 +
{{#set: right-end-position=61381}}
 +
{{#set: left-end-position=33959}}
 +
{{#set: centisome-position=8.395822   }}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=1}}
+
{{#set: nb reaction associated=4}}
 +
{{#set: nb pathway associated=9}}

Revision as of 12:57, 14 January 2021

Gene SJ09890

  • transcription-direction:
    • positive
  • right-end-position:
    • 61381
  • left-end-position:
    • 33959
  • centisome-position:
    • 8.395822

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-5340
    • 2 reactions found over 2 reactions in the full pathway
  • PWY-7805
    • 2 reactions found over 8 reactions in the full pathway
  • PWY-7807
    • 2 reactions found over 7 reactions in the full pathway
  • PWY-6932
    • 1 reactions found over 5 reactions in the full pathway
  • DISSULFRED-PWY
    • 2 reactions found over 4 reactions in the full pathway
  • P224-PWY
    • 2 reactions found over 5 reactions in the full pathway
  • PWY-6683
    • 3 reactions found over 3 reactions in the full pathway
  • SULFMETII-PWY
    • 3 reactions found over 3 reactions in the full pathway
  • PWY-5278
    • 2 reactions found over 2 reactions in the full pathway




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