Difference between revisions of "SJ03148"

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(Created page with "Category:metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-2750 CPD-2750] == * common-name: ** trans-3'-hydroxycotinine * smiles: ** c1(=o)(c(o)c[ch](...")
 
(Created page with "Category:gene == Gene SJ03148 == * transcription-direction: ** positive * right-end-position: ** 470756 * left-end-position: ** 467598 * centisome-position: ** 88.24702...")
 
(9 intermediate revisions by 5 users not shown)
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[[Category:metabolite]]
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[[Category:gene]]
== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-2750 CPD-2750] ==
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== Gene SJ03148 ==
* common-name:
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* transcription-direction:
** trans-3'-hydroxycotinine
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** positive
* smiles:
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* right-end-position:
** c1(=o)(c(o)c[ch](n(c)1)c2(c=nc=cc=2))
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** 470756
* inchi-key:
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* left-end-position:
** xokcjxzznauiqn-dtwkunhwsa-n
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** 467598
* molecular-weight:
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* centisome-position:
** 192.217
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** 88.24702   
== Reaction(s) known to consume the compound ==
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== Organism(s) associated with this gene  ==
* [[RXN66-162]]
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* [[S.japonica_carotenoid_curated]]
== Reaction(s) known to produce the compound ==
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== Reaction(s) associated ==
* [[RXN66-161]]
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* [[2.3.1.157-RXN]]
== Reaction(s) of unknown directionality ==
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** Category: [[annotation]]
{{#set: common-name=trans-3'-hydroxycotinine}}
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
{{#set: inchi-key=inchikey=xokcjxzznauiqn-dtwkunhwsa-n}}
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* [[NAG1P-URIDYLTRANS-RXN]]
{{#set: molecular-weight=192.217}}
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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== Pathway(s) associated ==
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* [[UDPNAGSYN-PWY]]
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** '''4''' reactions found over '''5''' reactions in the full pathway
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* [[PWY0-1261]]
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** '''3''' reactions found over '''12''' reactions in the full pathway
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* [[UDPNACETYLGALSYN-PWY]]
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** '''3''' reactions found over '''6''' reactions in the full pathway
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* [[PWY-5514]]
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** '''5''' reactions found over '''7''' reactions in the full pathway
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{{#set: transcription-direction=positive}}
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{{#set: right-end-position=470756}}
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{{#set: left-end-position=467598}}
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{{#set: centisome-position=88.24702    }}
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{{#set: organism associated=S.japonica_carotenoid_curated}}
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{{#set: nb reaction associated=2}}
 +
{{#set: nb pathway associated=4}}

Latest revision as of 11:04, 18 March 2021

Gene SJ03148

  • transcription-direction:
    • positive
  • right-end-position:
    • 470756
  • left-end-position:
    • 467598
  • centisome-position:
    • 88.24702

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • UDPNAGSYN-PWY
    • 4 reactions found over 5 reactions in the full pathway
  • PWY0-1261
    • 3 reactions found over 12 reactions in the full pathway
  • UDPNACETYLGALSYN-PWY
    • 3 reactions found over 6 reactions in the full pathway
  • PWY-5514
    • 5 reactions found over 7 reactions in the full pathway