Difference between revisions of "SJ03173"

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(Created page with "Category:gene == Gene SJ15067 == * transcription-direction: ** positive * right-end-position: ** 129025 * left-end-position: ** 121627 * centisome-position: ** 40.164253...")
(Created page with "Category:gene == Gene SJ03173 == * transcription-direction: ** negative * right-end-position: ** 26767 * left-end-position: ** 9146 * centisome-position: ** 7.361321 =...")
 
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[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ15067 ==
+
== Gene SJ03173 ==
 
* transcription-direction:
 
* transcription-direction:
−
** positive
+
** negative
 
* right-end-position:
 
* right-end-position:
−
** 129025
+
** 26767
 
* left-end-position:
 
* left-end-position:
−
** 121627
+
** 9146
 
* centisome-position:
 
* centisome-position:
−
** 40.164253    
+
** 7.361321    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
−
* [[S.japonica_sterols_curated]]
+
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[MANNPISOM-RXN]]
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 +
* [[3.1.1.64-RXN]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[CARBOXYLESTERASE-RXN]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[ISOLEUCINE--TRNA-LIGASE-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
−
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
−
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[RETINYL-PALMITATE-ESTERASE-RXN]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-10711]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-10767]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-12252]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-12575]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXNQT-4366]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
</div>
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
* [[PWY-3861]]
+
* [[TRNA-CHARGING-PWY]]
−
** '''2''' reactions found over '''4''' reactions in the full pathway
+
** '''21''' reactions found over '''21''' reactions in the full pathway
−
* [[PWY-5659]]
+
* [[PWY-6303]]
−
** '''3''' reactions found over '''4''' reactions in the full pathway
+
** '''1''' reactions found over '''2''' reactions in the full pathway
−
* [[PWY-7586]]
+
* [[PWY-6857]]
−
** '''2''' reactions found over '''3''' reactions in the full pathway
+
** '''3''' reactions found over '''7''' reactions in the full pathway
−
* [[PWY-7456]]
+
{{#set: transcription-direction=negative}}
−
** '''2''' reactions found over '''7''' reactions in the full pathway
+
{{#set: right-end-position=26767}}
−
* [[PWY-6992]]
+
{{#set: left-end-position=9146}}
−
** '''4''' reactions found over '''5''' reactions in the full pathway
+
{{#set: centisome-position=7.361321   }}
−
* [[PWY-882]]
+
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
** '''6''' reactions found over '''8''' reactions in the full pathway
+
{{#set: nb reaction associated=9}}
−
* [[PWY-3881]]
+
{{#set: nb pathway associated=3}}
−
** '''2''' reactions found over '''3''' reactions in the full pathway
 
−
* [[MANNCAT-PWY]]
 
−
** '''1''' reactions found over '''1''' reactions in the full pathway
 
−
{{#set: transcription-direction=positive}}
 
−
{{#set: right-end-position=129025}}
 
−
{{#set: left-end-position=121627}}
 
−
{{#set: centisome-position=40.164253   }}
 
−
{{#set: organism associated=S.japonica_sterols_curated}}
 
−
{{#set: nb reaction associated=1}}
 
−
{{#set: nb pathway associated=8}}
 

Latest revision as of 11:07, 18 March 2021

Gene SJ03173

  • transcription-direction:
    • negative
  • right-end-position:
    • 26767
  • left-end-position:
    • 9146
  • centisome-position:
    • 7.361321

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • TRNA-CHARGING-PWY
    • 21 reactions found over 21 reactions in the full pathway
  • PWY-6303
    • 1 reactions found over 2 reactions in the full pathway
  • PWY-6857
    • 3 reactions found over 7 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ03173&oldid=134888"