Difference between revisions of "SJ03174"

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(Created page with "Category:metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD0-2123 CPD0-2123] == * common-name: ** 3-oxodecanoyl-coa * smiles: ** cccccccc(=o)cc(=o)sccn...")
(Created page with "Category:gene == Gene SJ03174 == * transcription-direction: ** negative * right-end-position: ** 37192 * left-end-position: ** 27897 * centisome-position: ** 22.453398...")
 
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[[Category:metabolite]]
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[[Category:gene]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD0-2123 CPD0-2123] ==
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== Gene SJ03174 ==
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* common-name:
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* transcription-direction:
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** 3-oxodecanoyl-coa
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** negative
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* smiles:
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* right-end-position:
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** cccccccc(=o)cc(=o)sccnc(=o)ccnc(=o)c(o)c(c)(c)cop(=o)(op(=o)(occ1(c(op([o-])(=o)[o-])c(o)c(o1)n3(c2(=c(c(n)=nc=n2)n=c3))))[o-])[o-]
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** 37192
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* inchi-key:
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* left-end-position:
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** azcvxmaplhsiky-hsjnekgzsa-j
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** 27897
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* molecular-weight:
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* centisome-position:
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** 931.738
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** 22.453398   
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== Reaction(s) known to consume the compound ==
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== Organism(s) associated with this gene  ==
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* [[ACACT4]]
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* [[S.japonica_carotenoid_curated]]
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* [[HACD4h]]
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== Reaction(s) associated ==
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* [[RXN-13617]]
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<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
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== Reaction(s) known to produce the compound ==
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* [[3.1.1.64-RXN]]
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* [[ACACT4]]
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** Category: [[annotation]]
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* [[ACACT4h]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[HACD4h]]
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* [[CARBOXYLESTERASE-RXN]]
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* [[RXN-12490]]
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** Category: [[annotation]]
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== Reaction(s) of unknown directionality ==
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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{{#set: common-name=3-oxodecanoyl-coa}}
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* [[ISOLEUCINE--TRNA-LIGASE-RXN]]
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{{#set: inchi-key=inchikey=azcvxmaplhsiky-hsjnekgzsa-j}}
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** Category: [[annotation]]
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{{#set: molecular-weight=931.738}}
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RETINYL-PALMITATE-ESTERASE-RXN]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN-10711]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN-10767]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN-12252]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN-12575]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXNQT-4366]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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</div>
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== Pathway(s) associated ==
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* [[TRNA-CHARGING-PWY]]
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** '''21''' reactions found over '''21''' reactions in the full pathway
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* [[PWY-6303]]
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** '''1''' reactions found over '''2''' reactions in the full pathway
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* [[PWY-6857]]
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** '''3''' reactions found over '''7''' reactions in the full pathway
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{{#set: transcription-direction=negative}}
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{{#set: right-end-position=37192}}
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{{#set: left-end-position=27897}}
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{{#set: centisome-position=22.453398    }}
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{{#set: organism associated=S.japonica_carotenoid_curated}}
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{{#set: nb reaction associated=9}}
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{{#set: nb pathway associated=3}}

Latest revision as of 11:03, 18 March 2021

Gene SJ03174

  • transcription-direction:
    • negative
  • right-end-position:
    • 37192
  • left-end-position:
    • 27897
  • centisome-position:
    • 22.453398

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • TRNA-CHARGING-PWY
    • 21 reactions found over 21 reactions in the full pathway
  • PWY-6303
    • 1 reactions found over 2 reactions in the full pathway
  • PWY-6857
    • 3 reactions found over 7 reactions in the full pathway




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