Difference between revisions of "SJ03217"

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(Created page with "Category:metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-13851 CPD-13851] == * common-name: ** 2-hydroxy-datp * smiles: ** c(c3(c(cc(n2(c1(=c(c(n)=n...")
(Created page with "Category:gene == Gene SJ03217 == * transcription-direction: ** positive * right-end-position: ** 65655 * left-end-position: ** 19759 * centisome-position: ** 16.030863...")
 
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[[Category:metabolite]]
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[[Category:gene]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-13851 CPD-13851] ==
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== Gene SJ03217 ==
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* common-name:
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* transcription-direction:
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** 2-hydroxy-datp
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** positive
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* smiles:
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* right-end-position:
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** c(c3(c(cc(n2(c1(=c(c(n)=nc(=o)n1)n=c2)))o3)o))op(op(op([o-])(=o)[o-])([o-])=o)([o-])=o
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** 65655
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* inchi-key:
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* left-end-position:
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** uoacbprdwrdehj-kvqbguixsa-j
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** 19759
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* molecular-weight:
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* centisome-position:
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** 503.152
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** 16.030863   
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== Reaction(s) known to consume the compound ==
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== Organism(s) associated with this gene  ==
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* [[RXN0-6957]]
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* [[S.japonica_carotenoid_curated]]
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== Reaction(s) known to produce the compound ==
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== Reaction(s) associated ==
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== Reaction(s) of unknown directionality ==
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<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
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{{#set: common-name=2-hydroxy-datp}}
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* [[PEROXID-RXN]]
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{{#set: inchi-key=inchikey=uoacbprdwrdehj-kvqbguixsa-j}}
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** Category: [[annotation]]
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{{#set: molecular-weight=503.152}}
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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** Category: [[orthology]]
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*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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* [[RXN-14240]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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** Category: [[orthology]]
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*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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* [[RXN-15288]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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** Category: [[orthology]]
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*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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* [[RXN-17352]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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** Category: [[orthology]]
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*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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* [[RXN-8635]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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** Category: [[orthology]]
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*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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</div>
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== Pathway(s) associated ==
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* [[PWY-7214]]
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** '''1''' reactions found over '''2''' reactions in the full pathway
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* [[PWY-7445]]
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** '''1''' reactions found over '''4''' reactions in the full pathway
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* [[PWY-5466]]
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** '''2''' reactions found over '''10''' reactions in the full pathway
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* [[PWY-6824]]
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** '''2''' reactions found over '''10''' reactions in the full pathway
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* [[PWY-5469]]
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** '''2''' reactions found over '''8''' reactions in the full pathway
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* [[PWY-5461]]
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** '''1''' reactions found over '''1''' reactions in the full pathway
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{{#set: transcription-direction=positive}}
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{{#set: right-end-position=65655}}
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{{#set: left-end-position=19759}}
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{{#set: centisome-position=16.030863    }}
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{{#set: organism associated=S.japonica_carotenoid_curated}}
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{{#set: nb reaction associated=5}}
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{{#set: nb pathway associated=6}}

Latest revision as of 11:03, 18 March 2021

Gene SJ03217

  • transcription-direction:
    • positive
  • right-end-position:
    • 65655
  • left-end-position:
    • 19759
  • centisome-position:
    • 16.030863

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-7214
    • 1 reactions found over 2 reactions in the full pathway
  • PWY-7445
    • 1 reactions found over 4 reactions in the full pathway
  • PWY-5466
    • 2 reactions found over 10 reactions in the full pathway
  • PWY-6824
    • 2 reactions found over 10 reactions in the full pathway
  • PWY-5469
    • 2 reactions found over 8 reactions in the full pathway
  • PWY-5461
    • 1 reactions found over 1 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ03217&oldid=132779"