Difference between revisions of "SJ03218"

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(Created page with "Category:gene == Gene SJ07743 == * transcription-direction: ** positive * right-end-position: ** 812751 * left-end-position: ** 805273 * centisome-position: ** 90.998604...")
(Created page with "Category:gene == Gene SJ18426 == * transcription-direction: ** negative * right-end-position: ** 118883 * left-end-position: ** 109787 * centisome-position: ** 44.49736...")
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[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ07743 ==
+
== Gene SJ18426 ==
 
* transcription-direction:
 
* transcription-direction:
−
** positive
+
** negative
 
* right-end-position:
 
* right-end-position:
−
** 812751
+
** 118883
 
* left-end-position:
 
* left-end-position:
−
** 805273
+
** 109787
 
* centisome-position:
 
* centisome-position:
−
** 90.998604    
+
** 44.49736    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[RIB5PISOM-RXN]]
+
* [[RXN-11842]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-11843]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[TRNA-PSEUDOURIDINE-SYNTHASE-I-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
−
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
+
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
−
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
+
{{#set: transcription-direction=negative}}
−
== Pathway(s) associated ==
+
{{#set: right-end-position=118883}}
−
* [[P124-PWY]]
+
{{#set: left-end-position=109787}}
−
** '''12''' reactions found over '''15''' reactions in the full pathway
+
{{#set: centisome-position=44.49736   }}
−
* [[P185-PWY]]
 
−
** '''11''' reactions found over '''12''' reactions in the full pathway
 
−
* [[NONOXIPENT-PWY]]
 
−
** '''5''' reactions found over '''5''' reactions in the full pathway
 
−
* [[PWY-5723]]
 
−
** '''10''' reactions found over '''10''' reactions in the full pathway
 
−
* [[CALVIN-PWY]]
 
−
** '''12''' reactions found over '''13''' reactions in the full pathway
 
−
* [[PWY-1861]]
 
−
** '''7''' reactions found over '''9''' reactions in the full pathway
 
−
{{#set: transcription-direction=positive}}
 
−
{{#set: right-end-position=812751}}
 
−
{{#set: left-end-position=805273}}
 
−
{{#set: centisome-position=90.998604   }}
 
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=1}}
+
{{#set: nb reaction associated=3}}
−
{{#set: nb pathway associated=6}}
 

Revision as of 18:43, 14 January 2021

Gene SJ18426

  • transcription-direction:
    • negative
  • right-end-position:
    • 118883
  • left-end-position:
    • 109787
  • centisome-position:
    • 44.49736

Organism(s) associated with this gene

Reaction(s) associated




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ03218&oldid=93066"