Difference between revisions of "SJ03219"

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(Created page with "Category:gene == Gene SJ10070 == * transcription-direction: ** positive * right-end-position: ** 264697 * left-end-position: ** 246220 * centisome-position: ** 61.807484...")
(Created page with "Category:gene == Gene SJ06657 == * transcription-direction: ** negative * right-end-position: ** 51994 * left-end-position: ** 42460 * centisome-position: ** 8.993970...")
Line 1: Line 1:
 
[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ10070 ==
+
== Gene SJ06657 ==
 
* transcription-direction:
 
* transcription-direction:
−
** positive
+
** negative
 
* right-end-position:
 
* right-end-position:
−
** 264697
+
** 51994
 
* left-end-position:
 
* left-end-position:
−
** 246220
+
** 42460
 
* centisome-position:
 
* centisome-position:
−
** 61.807484    
+
** 8.993970    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
−
* [[S.japonica_carotenoid_curated]]
+
* [[S.japonica_sterols_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[RXN-12727]]
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 +
* [[6.3.4.10-RXN]]
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[6.3.4.11-RXN]]
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[6.3.4.9-RXN]]
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[BIOTINLIG-RXN]]
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[RXN-13039]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-17127]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-8654]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-8655]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN0-1141]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[TRNA-PSEUDOURIDINE-SYNTHASE-I-RXN]]
+
* [[RXN0-5098]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN0-7192]]
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
−
{{#set: transcription-direction=positive}}
+
</div>
−
{{#set: right-end-position=264697}}
+
== Pathway(s) associated ==
−
{{#set: left-end-position=246220}}
+
* [[PWY0-1264]]
−
{{#set: centisome-position=61.807484   }}
+
** '''3''' reactions found over '''4''' reactions in the full pathway
−
{{#set: organism associated=S.japonica_carotenoid_curated}}
+
* [[PWY-6984]]
−
{{#set: nb reaction associated=2}}
+
** '''2''' reactions found over '''4''' reactions in the full pathway
 +
* [[PWY0-522]]
 +
** '''2''' reactions found over '''2''' reactions in the full pathway
 +
* [[PWY0-1275]]
 +
** '''2''' reactions found over '''2''' reactions in the full pathway
 +
{{#set: transcription-direction=negative}}
 +
{{#set: right-end-position=51994}}
 +
{{#set: left-end-position=42460}}
 +
{{#set: centisome-position=8.993970   }}
 +
{{#set: organism associated=S.japonica_sterols_curated}}
 +
{{#set: nb reaction associated=11}}
 +
{{#set: nb pathway associated=4}}

Revision as of 20:28, 18 December 2020

Gene SJ06657

  • transcription-direction:
    • negative
  • right-end-position:
    • 51994
  • left-end-position:
    • 42460
  • centisome-position:
    • 8.993970

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY0-1264
    • 3 reactions found over 4 reactions in the full pathway
  • PWY-6984
    • 2 reactions found over 4 reactions in the full pathway
  • PWY0-522
    • 2 reactions found over 2 reactions in the full pathway
  • PWY0-1275
    • 2 reactions found over 2 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ03219&oldid=44855"