Difference between revisions of "SJ03226"

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(Created page with "Category:gene == Gene SJ03226 == * transcription-direction: ** positive * right-end-position: ** 188306 * left-end-position: ** 138541 * centisome-position: ** 26.23187...")
(Created page with "Category:gene == Gene SJ21513 == * transcription-direction: ** positive * right-end-position: ** 171648 * left-end-position: ** 165718 * centisome-position: ** 87.023506...")
Line 1: Line 1:
 
[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ03226 ==
+
== Gene SJ21513 ==
 
* transcription-direction:
 
* transcription-direction:
 
** positive
 
** positive
 
* right-end-position:
 
* right-end-position:
−
** 188306
+
** 171648
 
* left-end-position:
 
* left-end-position:
−
** 138541
+
** 165718
 
* centisome-position:
 
* centisome-position:
−
** 26.23187    
+
** 87.023506    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[HOMOCYSMET-RXN]]
+
* [[F16ALDOLASE-RXN]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
−
* [[HOMOCYSMETB12-RXN]]
+
* [[RXN-8631]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
−
* [[HOMOCYSTEINE-S-METHYLTRANSFERASE-RXN]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
* [[PWY-5041]]
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
−
** '''3''' reactions found over '''4''' reactions in the full pathway
+
* [[CALVIN-PWY]]
−
* [[HSERMETANA-PWY]]
+
** '''12''' reactions found over '''13''' reactions in the full pathway
−
** '''3''' reactions found over '''2''' reactions in the full pathway
+
* [[GLUCONEO-PWY]]
−
* [[HOMOSER-METSYN-PWY]]
+
** '''12''' reactions found over '''13''' reactions in the full pathway
−
** '''4''' reactions found over '''7''' reactions in the full pathway
+
* [[PWY-7385]]
−
* [[PWY-6151]]
+
** '''7''' reactions found over '''9''' reactions in the full pathway
−
** '''3''' reactions found over '''4''' reactions in the full pathway
+
* [[P341-PWY]]
−
* [[PWY-702]]
+
** '''6''' reactions found over '''10''' reactions in the full pathway
−
** '''5''' reactions found over '''6''' reactions in the full pathway
+
* [[GLYCOLYSIS]]
−
* [[PWY-3841]]
+
** '''11''' reactions found over '''12''' reactions in the full pathway
−
** '''9''' reactions found over '''11''' reactions in the full pathway
+
* [[ANAGLYCOLYSIS-PWY]]
−
* [[1CMET2-PWY]]
+
** '''10''' reactions found over '''11''' reactions in the full pathway
−
** '''8''' reactions found over '''9''' reactions in the full pathway
+
* [[PWY66-399]]
−
* [[ADENOSYLHOMOCYSCAT-PWY]]
+
** '''11''' reactions found over '''12''' reactions in the full pathway
−
** '''3''' reactions found over '''3''' reactions in the full pathway
+
* [[PWY-1042]]
−
* [[PWY-2201]]
 
 
** '''9''' reactions found over '''10''' reactions in the full pathway
 
** '''9''' reactions found over '''10''' reactions in the full pathway
 +
* [[SUCSYN-PWY]]
 +
** '''6''' reactions found over '''7''' reactions in the full pathway
 +
* [[P185-PWY]]
 +
** '''11''' reactions found over '''12''' reactions in the full pathway
 +
* [[PWY-1861]]
 +
** '''7''' reactions found over '''9''' reactions in the full pathway
 +
* [[PWY-5484]]
 +
** '''10''' reactions found over '''11''' reactions in the full pathway
 +
* [[PWY-6142]]
 +
** '''10''' reactions found over '''13''' reactions in the full pathway
 +
* [[PWY66-373]]
 +
** '''3''' reactions found over '''5''' reactions in the full pathway
 +
</div>
 
{{#set: transcription-direction=positive}}
 
{{#set: transcription-direction=positive}}
−
{{#set: right-end-position=188306}}
+
{{#set: right-end-position=171648}}
−
{{#set: left-end-position=138541}}
+
{{#set: left-end-position=165718}}
−
{{#set: centisome-position=26.23187   }}
+
{{#set: centisome-position=87.023506   }}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=3}}
+
{{#set: nb reaction associated=2}}
−
{{#set: nb pathway associated=9}}
+
{{#set: nb pathway associated=14}}

Revision as of 11:04, 15 January 2021

Gene SJ21513

  • transcription-direction:
    • positive
  • right-end-position:
    • 171648
  • left-end-position:
    • 165718
  • centisome-position:
    • 87.023506

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • CALVIN-PWY
    • 12 reactions found over 13 reactions in the full pathway
  • GLUCONEO-PWY
    • 12 reactions found over 13 reactions in the full pathway
  • PWY-7385
    • 7 reactions found over 9 reactions in the full pathway
  • P341-PWY
    • 6 reactions found over 10 reactions in the full pathway
  • GLYCOLYSIS
    • 11 reactions found over 12 reactions in the full pathway
  • ANAGLYCOLYSIS-PWY
    • 10 reactions found over 11 reactions in the full pathway
  • PWY66-399
    • 11 reactions found over 12 reactions in the full pathway
  • PWY-1042
    • 9 reactions found over 10 reactions in the full pathway
  • SUCSYN-PWY
    • 6 reactions found over 7 reactions in the full pathway
  • P185-PWY
    • 11 reactions found over 12 reactions in the full pathway
  • PWY-1861
    • 7 reactions found over 9 reactions in the full pathway
  • PWY-5484
    • 10 reactions found over 11 reactions in the full pathway
  • PWY-6142
    • 10 reactions found over 13 reactions in the full pathway
  • PWY66-373
    • 3 reactions found over 5 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ03226&oldid=106991"