Difference between revisions of "SJ03226"

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(Created page with "Category:gene == Gene SJ21513 == * transcription-direction: ** positive * right-end-position: ** 171648 * left-end-position: ** 165718 * centisome-position: ** 87.023506...")
(Created page with "Category:gene == Gene SJ03226 == * transcription-direction: ** positive * right-end-position: ** 188306 * left-end-position: ** 138541 * centisome-position: ** 26.23187...")
 
Line 1: Line 1:
 
[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ21513 ==
+
== Gene SJ03226 ==
 
* transcription-direction:
 
* transcription-direction:
 
** positive
 
** positive
 
* right-end-position:
 
* right-end-position:
−
** 171648
+
** 188306
 
* left-end-position:
 
* left-end-position:
−
** 165718
+
** 138541
 
* centisome-position:
 
* centisome-position:
−
** 87.023506    
+
** 26.23187    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[F16ALDOLASE-RXN]]
+
* [[HOMOCYSMET-RXN]]
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[HOMOCYSMETB12-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
−
* [[RXN-8631]]
+
* [[HOMOCYSTEINE-S-METHYLTRANSFERASE-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* [[PWY-702]]
−
* [[CALVIN-PWY]]
+
** '''5''' reactions found over '''6''' reactions in the full pathway
−
** '''12''' reactions found over '''13''' reactions in the full pathway
+
* [[PWY-5041]]
−
* [[GLUCONEO-PWY]]
+
** '''3''' reactions found over '''3''' reactions in the full pathway
−
** '''12''' reactions found over '''13''' reactions in the full pathway
+
* [[HSERMETANA-PWY]]
−
* [[PWY-7385]]
+
** '''3''' reactions found over '''2''' reactions in the full pathway
−
** '''7''' reactions found over '''9''' reactions in the full pathway
+
* [[HOMOSER-METSYN-PWY]]
−
* [[P341-PWY]]
+
** '''4''' reactions found over '''5''' reactions in the full pathway
−
** '''6''' reactions found over '''10''' reactions in the full pathway
+
* [[PWY-6151]]
−
* [[GLYCOLYSIS]]
+
** '''3''' reactions found over '''4''' reactions in the full pathway
−
** '''11''' reactions found over '''12''' reactions in the full pathway
+
* [[PWY-3841]]
−
* [[ANAGLYCOLYSIS-PWY]]
+
** '''9''' reactions found over '''11''' reactions in the full pathway
−
** '''10''' reactions found over '''11''' reactions in the full pathway
+
* [[1CMET2-PWY]]
−
* [[PWY66-399]]
+
** '''8''' reactions found over '''9''' reactions in the full pathway
−
** '''11''' reactions found over '''12''' reactions in the full pathway
+
* [[ADENOSYLHOMOCYSCAT-PWY]]
−
* [[PWY-1042]]
+
** '''3''' reactions found over '''3''' reactions in the full pathway
 +
* [[PWY-2201]]
 
** '''9''' reactions found over '''10''' reactions in the full pathway
 
** '''9''' reactions found over '''10''' reactions in the full pathway
−
* [[SUCSYN-PWY]]
 
−
** '''6''' reactions found over '''7''' reactions in the full pathway
 
−
* [[P185-PWY]]
 
−
** '''11''' reactions found over '''12''' reactions in the full pathway
 
−
* [[PWY-1861]]
 
−
** '''7''' reactions found over '''9''' reactions in the full pathway
 
−
* [[PWY-5484]]
 
−
** '''10''' reactions found over '''11''' reactions in the full pathway
 
−
* [[PWY-6142]]
 
−
** '''10''' reactions found over '''13''' reactions in the full pathway
 
−
* [[PWY66-373]]
 
−
** '''3''' reactions found over '''5''' reactions in the full pathway
 
−
</div>
 
 
{{#set: transcription-direction=positive}}
 
{{#set: transcription-direction=positive}}
−
{{#set: right-end-position=171648}}
+
{{#set: right-end-position=188306}}
−
{{#set: left-end-position=165718}}
+
{{#set: left-end-position=138541}}
−
{{#set: centisome-position=87.023506   }}
+
{{#set: centisome-position=26.23187   }}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=2}}
+
{{#set: nb reaction associated=3}}
−
{{#set: nb pathway associated=14}}
+
{{#set: nb pathway associated=9}}

Latest revision as of 11:03, 18 March 2021

Gene SJ03226

  • transcription-direction:
    • positive
  • right-end-position:
    • 188306
  • left-end-position:
    • 138541
  • centisome-position:
    • 26.23187

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-702
    • 5 reactions found over 6 reactions in the full pathway
  • PWY-5041
    • 3 reactions found over 3 reactions in the full pathway
  • HSERMETANA-PWY
    • 3 reactions found over 2 reactions in the full pathway
  • HOMOSER-METSYN-PWY
    • 4 reactions found over 5 reactions in the full pathway
  • PWY-6151
    • 3 reactions found over 4 reactions in the full pathway
  • PWY-3841
    • 9 reactions found over 11 reactions in the full pathway
  • 1CMET2-PWY
    • 8 reactions found over 9 reactions in the full pathway
  • ADENOSYLHOMOCYSCAT-PWY
    • 3 reactions found over 3 reactions in the full pathway
  • PWY-2201
    • 9 reactions found over 10 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ03226&oldid=133035"