Difference between revisions of "SJ03226"

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(Created page with "Category:metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=C5 C5] == * common-name: ** undecaprenyldiphospho-n-acetylmuramoyl-l-alanyl-γ-d-glutamyl-...")
(Created page with "Category:gene == Gene SJ21513 == * transcription-direction: ** positive * right-end-position: ** 171648 * left-end-position: ** 165718 * centisome-position: ** 87.023506...")
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[[Category:metabolite]]
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[[Category:gene]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=C5 C5] ==
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== Gene SJ21513 ==
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* common-name:
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* transcription-direction:
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** undecaprenyldiphospho-n-acetylmuramoyl-l-alanyl-γ-d-glutamyl-meso-2,6-diaminopimeloyl-d-alanyl-d-alanine
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** positive
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* smiles:
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* right-end-position:
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** cc(c)=cccc(c)=cccc(c)=cccc(=cccc(=cccc(=cccc(c)=cccc(=cccc(=cccc(=cccc(=ccop(op([o-])(=o)oc1(c(nc(=o)c)c(oc(c)c(=o)nc(c)c(=o)nc(c(=o)[o-])ccc(=o)nc(cccc([n+])c(=o)[o-])c(nc(c)c(=o)nc(c)c([o-])=o)=o)c(o)c(co)o1))([o-])=o)c)c)c)c)c)c)c
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** 171648
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* inchi-key:
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* left-end-position:
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** pnwzqtonlrrpst-kldrqjoasa-j
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** 165718
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* molecular-weight:
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* centisome-position:
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** 1713.036
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** 87.023506   
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== Reaction(s) known to consume the compound ==
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== Organism(s) associated with this gene  ==
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== Reaction(s) known to produce the compound ==
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* [[S.japonica_sterols_curated]]
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* [[PHOSNACMURPENTATRANS-RXN]]
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== Reaction(s) associated ==
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== Reaction(s) of unknown directionality ==
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* [[F16ALDOLASE-RXN]]
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{{#set: common-name=undecaprenyldiphospho-n-acetylmuramoyl-l-alanyl-γ-d-glutamyl-meso-2,6-diaminopimeloyl-d-alanyl-d-alanine}}
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** Category: [[annotation]]
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{{#set: inchi-key=inchikey=pnwzqtonlrrpst-kldrqjoasa-j}}
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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{{#set: molecular-weight=1713.036}}
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** Category: [[orthology]]
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*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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* [[RXN-8631]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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** Category: [[orthology]]
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*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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== Pathway(s) associated ==
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<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
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* [[CALVIN-PWY]]
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** '''12''' reactions found over '''13''' reactions in the full pathway
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* [[GLUCONEO-PWY]]
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** '''12''' reactions found over '''13''' reactions in the full pathway
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* [[PWY-7385]]
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** '''7''' reactions found over '''9''' reactions in the full pathway
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* [[P341-PWY]]
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** '''6''' reactions found over '''10''' reactions in the full pathway
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* [[GLYCOLYSIS]]
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** '''11''' reactions found over '''12''' reactions in the full pathway
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* [[ANAGLYCOLYSIS-PWY]]
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** '''10''' reactions found over '''11''' reactions in the full pathway
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* [[PWY66-399]]
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** '''11''' reactions found over '''12''' reactions in the full pathway
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* [[PWY-1042]]
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** '''9''' reactions found over '''10''' reactions in the full pathway
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* [[SUCSYN-PWY]]
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** '''6''' reactions found over '''7''' reactions in the full pathway
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* [[P185-PWY]]
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** '''11''' reactions found over '''12''' reactions in the full pathway
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* [[PWY-1861]]
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** '''7''' reactions found over '''9''' reactions in the full pathway
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* [[PWY-5484]]
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** '''10''' reactions found over '''11''' reactions in the full pathway
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* [[PWY-6142]]
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** '''10''' reactions found over '''13''' reactions in the full pathway
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* [[PWY66-373]]
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** '''3''' reactions found over '''5''' reactions in the full pathway
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</div>
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{{#set: transcription-direction=positive}}
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{{#set: right-end-position=171648}}
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{{#set: left-end-position=165718}}
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{{#set: centisome-position=87.023506    }}
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{{#set: organism associated=S.japonica_sterols_curated}}
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{{#set: nb reaction associated=2}}
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{{#set: nb pathway associated=14}}

Revision as of 20:22, 18 December 2020

Gene SJ21513

  • transcription-direction:
    • positive
  • right-end-position:
    • 171648
  • left-end-position:
    • 165718
  • centisome-position:
    • 87.023506

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • CALVIN-PWY
    • 12 reactions found over 13 reactions in the full pathway
  • GLUCONEO-PWY
    • 12 reactions found over 13 reactions in the full pathway
  • PWY-7385
    • 7 reactions found over 9 reactions in the full pathway
  • P341-PWY
    • 6 reactions found over 10 reactions in the full pathway
  • GLYCOLYSIS
    • 11 reactions found over 12 reactions in the full pathway
  • ANAGLYCOLYSIS-PWY
    • 10 reactions found over 11 reactions in the full pathway
  • PWY66-399
    • 11 reactions found over 12 reactions in the full pathway
  • PWY-1042
    • 9 reactions found over 10 reactions in the full pathway
  • SUCSYN-PWY
    • 6 reactions found over 7 reactions in the full pathway
  • P185-PWY
    • 11 reactions found over 12 reactions in the full pathway
  • PWY-1861
    • 7 reactions found over 9 reactions in the full pathway
  • PWY-5484
    • 10 reactions found over 11 reactions in the full pathway
  • PWY-6142
    • 10 reactions found over 13 reactions in the full pathway
  • PWY66-373
    • 3 reactions found over 5 reactions in the full pathway




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