Difference between revisions of "SJ03227"

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(Created page with "Category:gene == Gene SJ12116 == * transcription-direction: ** positive * right-end-position: ** 99286 * left-end-position: ** 83347 * centisome-position: ** 23.01831...")
(Created page with "Category:gene == Gene SJ04338 == * transcription-direction: ** negative * right-end-position: ** 750420 * left-end-position: ** 740606 * centisome-position: ** 76.102356...")
Line 1: Line 1:
 
[[Category:gene]]
 
[[Category:gene]]
== Gene SJ12116 ==
+
== Gene SJ04338 ==
 
* transcription-direction:
 
* transcription-direction:
** positive
+
** negative
 
* right-end-position:
 
* right-end-position:
** 99286
+
** 750420
 
* left-end-position:
 
* left-end-position:
** 83347
+
** 740606
 
* centisome-position:
 
* centisome-position:
** 23.01831    
+
** 76.102356    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
* [[GLYCINE-N-METHYLTRANSFERASE-RXN]]
+
* [[RXN-11840]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
* [[RXN-13404]]
+
* [[TRNA-PSEUDOURIDINE-SYNTHASE-I-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
* [[RXN-13405]]
+
** Category: [[orthology]]
** Category: [[annotation]]
+
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
+
{{#set: transcription-direction=negative}}
* [[RXN-13406]]
+
{{#set: right-end-position=750420}}
** Category: [[annotation]]
+
{{#set: left-end-position=740606}}
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
+
{{#set: centisome-position=76.102356   }}
* [[RXN-9679]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* [[RXN-9680]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== Pathway(s) associated ==
 
* [[P541-PWY]]
 
** '''3''' reactions found over '''3''' reactions in the full pathway
 
* [[PWY-6004]]
 
** '''3''' reactions found over '''3''' reactions in the full pathway
 
{{#set: transcription-direction=positive}}
 
{{#set: right-end-position=99286}}
 
{{#set: left-end-position=83347}}
 
{{#set: centisome-position=23.01831   }}
 
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
{{#set: nb reaction associated=6}}
+
{{#set: nb reaction associated=2}}
{{#set: nb pathway associated=2}}
 

Revision as of 12:58, 14 January 2021

Gene SJ04338

  • transcription-direction:
    • negative
  • right-end-position:
    • 750420
  • left-end-position:
    • 740606
  • centisome-position:
    • 76.102356

Organism(s) associated with this gene

Reaction(s) associated