Difference between revisions of "SJ03230"

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(Created page with "Category:metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-17346 CPD-17346] == * common-name: ** 3-oxo-(11z,14z)-icosa-11,14-dienoyl-coa * smiles: **...")
 
(Created page with "Category:gene == Gene SJ03230 == * transcription-direction: ** positive * right-end-position: ** 281929 * left-end-position: ** 273256 * centisome-position: ** 51.73931...")
 
(9 intermediate revisions by 3 users not shown)
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[[Category:metabolite]]
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[[Category:gene]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-17346 CPD-17346] ==
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== Gene SJ03230 ==
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* common-name:
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* transcription-direction:
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** 3-oxo-(11z,14z)-icosa-11,14-dienoyl-coa
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** positive
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* smiles:
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* right-end-position:
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** cccccc=ccc=ccccccccc(=o)cc(=o)sccnc(=o)ccnc(=o)c(o)c(c)(c)cop(=o)(op(=o)(occ1(c(op([o-])(=o)[o-])c(o)c(o1)n3(c2(=c(c(n)=nc=n2)n=c3))))[o-])[o-]
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** 281929
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* inchi-key:
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* left-end-position:
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** puwduocpcwfefg-ygyqdceasa-j
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** 273256
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* molecular-weight:
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* centisome-position:
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** 1067.974
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** 51.73931   
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== Reaction(s) known to consume the compound ==
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== Organism(s) associated with this gene  ==
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* [[RXN-16095]]
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* [[S.japonica_carotenoid_curated]]
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== Reaction(s) known to produce the compound ==
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== Reaction(s) associated ==
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* [[RXN-16094]]
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* [[MYO-INOSITOL-1-PHOSPHATE-SYNTHASE-RXN]]
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== Reaction(s) of unknown directionality ==
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** Category: [[annotation]]
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{{#set: common-name=3-oxo-(11z,14z)-icosa-11,14-dienoyl-coa}}
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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{{#set: inchi-key=inchikey=puwduocpcwfefg-ygyqdceasa-j}}
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** Category: [[orthology]]
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{{#set: molecular-weight=1067.974}}
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*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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* [[RXN66-579]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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** Category: [[orthology]]
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*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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== Pathway(s) associated ==
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* [[PWY-4661]]
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** '''3''' reactions found over '''7''' reactions in the full pathway
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* [[PWY-6372]]
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** '''3''' reactions found over '''7''' reactions in the full pathway
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* [[PWY-2301]]
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** '''2''' reactions found over '''2''' reactions in the full pathway
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* [[PWY-6664]]
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** '''1''' reactions found over '''4''' reactions in the full pathway
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* [[PWY-6580]]
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** '''2''' reactions found over '''3''' reactions in the full pathway
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* [[PWY1G-0]]
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** '''3''' reactions found over '''6''' reactions in the full pathway
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{{#set: transcription-direction=positive}}
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{{#set: right-end-position=281929}}
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{{#set: left-end-position=273256}}
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{{#set: centisome-position=51.73931    }}
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{{#set: organism associated=S.japonica_carotenoid_curated}}
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{{#set: nb reaction associated=2}}
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{{#set: nb pathway associated=6}}

Latest revision as of 11:04, 18 March 2021

Gene SJ03230

  • transcription-direction:
    • positive
  • right-end-position:
    • 281929
  • left-end-position:
    • 273256
  • centisome-position:
    • 51.73931

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-4661
    • 3 reactions found over 7 reactions in the full pathway
  • PWY-6372
    • 3 reactions found over 7 reactions in the full pathway
  • PWY-2301
    • 2 reactions found over 2 reactions in the full pathway
  • PWY-6664
    • 1 reactions found over 4 reactions in the full pathway
  • PWY-6580
    • 2 reactions found over 3 reactions in the full pathway
  • PWY1G-0
    • 3 reactions found over 6 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ03230&oldid=133238"