Difference between revisions of "SJ03230"

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(Created page with "Category:gene == Gene SJ05432 == * transcription-direction: ** negative * right-end-position: ** 294071 * left-end-position: ** 285159 * centisome-position: ** 57.483273...")
(Created page with "Category:gene == Gene SJ03230 == * transcription-direction: ** positive * right-end-position: ** 281929 * left-end-position: ** 273256 * centisome-position: ** 51.73931...")
 
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[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ05432 ==
+
== Gene SJ03230 ==
 
* transcription-direction:
 
* transcription-direction:
−
** negative
+
** positive
 
* right-end-position:
 
* right-end-position:
−
** 294071
+
** 281929
 
* left-end-position:
 
* left-end-position:
−
** 285159
+
** 273256
 
* centisome-position:
 
* centisome-position:
−
** 57.483273    
+
** 51.73931    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* [[MYO-INOSITOL-1-PHOSPHATE-SYNTHASE-RXN]]
−
* [[3.1.1.64-RXN]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[CARBOXYLESTERASE-RXN]]
+
** Category: [[orthology]]
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[RXN66-579]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[GLUCONOLACT-RXN]]
+
** Category: [[orthology]]
−
** Category: [[annotation]]
+
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RETINYL-PALMITATE-ESTERASE-RXN]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-10711]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-10767]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-12252]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-12575]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-8783]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXNQT-4366]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
</div>
 
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
* [[GLUCOSE1PMETAB-PWY]]
+
* [[PWY-4661]]
−
** '''3''' reactions found over '''5''' reactions in the full pathway
+
** '''3''' reactions found over '''7''' reactions in the full pathway
−
* [[DHGLUCONATE-PYR-CAT-PWY]]
+
* [[PWY-6372]]
−
** '''1''' reactions found over '''5''' reactions in the full pathway
+
** '''3''' reactions found over '''7''' reactions in the full pathway
−
* [[PWY-2221]]
+
* [[PWY-2301]]
−
** '''6''' reactions found over '''9''' reactions in the full pathway
+
** '''2''' reactions found over '''2''' reactions in the full pathway
−
* [[NPGLUCAT-PWY]]
+
* [[PWY-6664]]
−
** '''4''' reactions found over '''9''' reactions in the full pathway
+
** '''1''' reactions found over '''4''' reactions in the full pathway
−
* [[PWY-5530]]
+
* [[PWY-6580]]
 
** '''2''' reactions found over '''3''' reactions in the full pathway
 
** '''2''' reactions found over '''3''' reactions in the full pathway
−
* [[PWY-7165]]
+
* [[PWY1G-0]]
−
** '''1''' reactions found over '''7''' reactions in the full pathway
 
−
* [[PWY-6303]]
 
−
** '''1''' reactions found over '''2''' reactions in the full pathway
 
−
* [[PWY-6857]]
 
−
** '''3''' reactions found over '''7''' reactions in the full pathway
 
−
* [[PWY3DJ-35471]]
 
 
** '''3''' reactions found over '''6''' reactions in the full pathway
 
** '''3''' reactions found over '''6''' reactions in the full pathway
−
{{#set: transcription-direction=negative}}
+
{{#set: transcription-direction=positive}}
−
{{#set: right-end-position=294071}}
+
{{#set: right-end-position=281929}}
−
{{#set: left-end-position=285159}}
+
{{#set: left-end-position=273256}}
−
{{#set: centisome-position=57.483273   }}
+
{{#set: centisome-position=51.73931   }}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=10}}
+
{{#set: nb reaction associated=2}}
−
{{#set: nb pathway associated=9}}
+
{{#set: nb pathway associated=6}}

Latest revision as of 11:04, 18 March 2021

Gene SJ03230

  • transcription-direction:
    • positive
  • right-end-position:
    • 281929
  • left-end-position:
    • 273256
  • centisome-position:
    • 51.73931

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-4661
    • 3 reactions found over 7 reactions in the full pathway
  • PWY-6372
    • 3 reactions found over 7 reactions in the full pathway
  • PWY-2301
    • 2 reactions found over 2 reactions in the full pathway
  • PWY-6664
    • 1 reactions found over 4 reactions in the full pathway
  • PWY-6580
    • 2 reactions found over 3 reactions in the full pathway
  • PWY1G-0
    • 3 reactions found over 6 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ03230&oldid=133238"