Difference between revisions of "SJ03269"

From metabolic_network
Jump to navigation Jump to search
(Created page with "Category:gene == Gene SJ21412 == * transcription-direction: ** positive * right-end-position: ** 121891 * left-end-position: ** 113875 * centisome-position: ** 58.89274...")
 
(Created page with "Category:gene == Gene SJ03269 == * transcription-direction: ** positive * right-end-position: ** 51052 * left-end-position: ** 38904 * centisome-position: ** 31.612307...")
 
(9 intermediate revisions by 5 users not shown)
Line 1: Line 1:
 
[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ21412 ==
+
== Gene SJ03269 ==
 
* transcription-direction:
 
* transcription-direction:
 
** positive
 
** positive
 
* right-end-position:
 
* right-end-position:
−
** 121891
+
** 51052
 
* left-end-position:
 
* left-end-position:
−
** 113875
+
** 38904
 
* centisome-position:
 
* centisome-position:
−
** 58.89274    
+
** 31.612307    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[RXN-7163]]
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 +
* [[RXN-8988]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[SUCCCOASYN-RXN]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 +
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[SUCCINATE--COA-LIGASE-GDP-FORMING-RXN]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[SUCL_LPAREN_gdp_RPAREN_m]]
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 +
</div>
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
* [[PWY-6554]]
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
−
** '''5''' reactions found over '''5''' reactions in the full pathway
+
* [[PWY-5749]]
−
* [[PWY-4661]]
+
** '''1''' reactions found over '''4''' reactions in the full pathway
−
** '''3''' reactions found over '''7''' reactions in the full pathway
+
* [[P42-PWY]]
−
* [[PWY-6362]]
+
** '''5''' reactions found over '''7''' reactions in the full pathway
−
** '''5''' reactions found over '''5''' reactions in the full pathway
+
* [[PWY-5392]]
−
* [[PWY-6372]]
+
** '''6''' reactions found over '''12''' reactions in the full pathway
−
** '''3''' reactions found over '''7''' reactions in the full pathway
+
* [[PWY-5690]]
−
* [[PWY-6369]]
 
 
** '''8''' reactions found over '''9''' reactions in the full pathway
 
** '''8''' reactions found over '''9''' reactions in the full pathway
−
* [[PWY-6361]]
+
* [[PWY66-398]]
−
** '''5''' reactions found over '''5''' reactions in the full pathway
+
** '''10''' reactions found over '''10''' reactions in the full pathway
 +
* [[PWY-6969]]
 +
** '''10''' reactions found over '''9''' reactions in the full pathway
 +
* [[PWY-5913]]
 +
** '''10''' reactions found over '''8''' reactions in the full pathway
 +
* [[PWY-5538]]
 +
** '''2''' reactions found over '''2''' reactions in the full pathway
 +
* [[PWY-5537]]
 +
** '''2''' reactions found over '''2''' reactions in the full pathway
 +
* [[TCA]]
 +
** '''9''' reactions found over '''10''' reactions in the full pathway
 +
* [[P23-PWY]]
 +
** '''9''' reactions found over '''12''' reactions in the full pathway
 +
* [[PWY-7384]]
 +
** '''6''' reactions found over '''10''' reactions in the full pathway
 +
* [[PWY-6728]]
 +
** '''11''' reactions found over '''19''' reactions in the full pathway
 +
</div>
 
{{#set: transcription-direction=positive}}
 
{{#set: transcription-direction=positive}}
−
{{#set: right-end-position=121891}}
+
{{#set: right-end-position=51052}}
−
{{#set: left-end-position=113875}}
+
{{#set: left-end-position=38904}}
−
{{#set: centisome-position=58.89274   }}
+
{{#set: centisome-position=31.612307   }}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=1}}
+
{{#set: nb reaction associated=4}}
−
{{#set: nb pathway associated=6}}
+
{{#set: nb pathway associated=13}}

Latest revision as of 11:10, 18 March 2021

Gene SJ03269

  • transcription-direction:
    • positive
  • right-end-position:
    • 51052
  • left-end-position:
    • 38904
  • centisome-position:
    • 31.612307

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-5749
    • 1 reactions found over 4 reactions in the full pathway
  • P42-PWY
    • 5 reactions found over 7 reactions in the full pathway
  • PWY-5392
    • 6 reactions found over 12 reactions in the full pathway
  • PWY-5690
    • 8 reactions found over 9 reactions in the full pathway
  • PWY66-398
    • 10 reactions found over 10 reactions in the full pathway
  • PWY-6969
    • 10 reactions found over 9 reactions in the full pathway
  • PWY-5913
    • 10 reactions found over 8 reactions in the full pathway
  • PWY-5538
    • 2 reactions found over 2 reactions in the full pathway
  • PWY-5537
    • 2 reactions found over 2 reactions in the full pathway
  • TCA
    • 9 reactions found over 10 reactions in the full pathway
  • P23-PWY
    • 9 reactions found over 12 reactions in the full pathway
  • PWY-7384
    • 6 reactions found over 10 reactions in the full pathway
  • PWY-6728
    • 11 reactions found over 19 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ03269&oldid=136581"