Difference between revisions of "SJ03315"

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(Created page with "Category:gene == Gene SJ04587 == * transcription-direction: ** positive * right-end-position: ** 80182 * left-end-position: ** 55366 * centisome-position: ** 52.78784...")
(Created page with "Category:gene == Gene SJ04583 == * transcription-direction: ** negative * right-end-position: ** 90284 * left-end-position: ** 74550 * centisome-position: ** 70.99526...")
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[[Category:gene]]
 
[[Category:gene]]
== Gene SJ04587 ==
+
== Gene SJ04583 ==
 
* transcription-direction:
 
* transcription-direction:
** positive
+
** negative
 
* right-end-position:
 
* right-end-position:
** 80182
+
** 90284
 
* left-end-position:
 
* left-end-position:
** 55366
+
** 74550
 
* centisome-position:
 
* centisome-position:
** 52.78784    
+
** 70.99526    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* [[TREHALA-RXN]]
* [[AMP5N]]
 
** Category: [[orthology]]
 
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
* [[ATPASE-RXN]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* [[DAMPH]]
 
** Category: [[orthology]]
 
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
* [[DMPH]]
 
** Category: [[orthology]]
 
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
* [[I5NT]]
 
** Category: [[orthology]]
 
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
* [[NUCLEOSIDE-TRIPHOSPHATASE-RXN]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* [[RXN-12195]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* [[RXN-12196]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* [[RXN-14143]]
 
** Category: [[orthology]]
 
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
* [[RXN-7609]]
 
** Category: [[orthology]]
 
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
* [[RXN0-5462]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
* [[TPH]]
 
** Category: [[orthology]]
 
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
* [[UMPP]]
 
** Category: [[orthology]]
 
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
* [[X5NT]]
 
 
** Category: [[orthology]]
 
** Category: [[orthology]]
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
+
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
</div>
 
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
* [[PWY-7210]]
+
* [[PWY0-1182]]
** '''8''' reactions found over '''8''' reactions in the full pathway
+
** '''2''' reactions found over '''2''' reactions in the full pathway
* [[PWY-7198]]
+
* [[PWY0-1466]]
** '''6''' reactions found over '''7''' reactions in the full pathway
+
** '''2''' reactions found over '''2''' reactions in the full pathway
* [[PWY-7184]]
+
{{#set: transcription-direction=negative}}
** '''9''' reactions found over '''9''' reactions in the full pathway
+
{{#set: right-end-position=90284}}
* [[PWY-6545]]
+
{{#set: left-end-position=74550}}
** '''8''' reactions found over '''9''' reactions in the full pathway
+
{{#set: centisome-position=70.99526   }}
* [[PWY-6606]]
 
** '''4''' reactions found over '''4''' reactions in the full pathway
 
* [[PWY-6607]]
 
** '''3''' reactions found over '''4''' reactions in the full pathway
 
* [[PWY-6608]]
 
** '''4''' reactions found over '''4''' reactions in the full pathway
 
{{#set: transcription-direction=positive}}
 
{{#set: right-end-position=80182}}
 
{{#set: left-end-position=55366}}
 
{{#set: centisome-position=52.78784   }}
 
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
{{#set: nb reaction associated=14}}
+
{{#set: nb reaction associated=1}}
{{#set: nb pathway associated=7}}
+
{{#set: nb pathway associated=2}}

Revision as of 11:10, 15 January 2021

Gene SJ04583

  • transcription-direction:
    • negative
  • right-end-position:
    • 90284
  • left-end-position:
    • 74550
  • centisome-position:
    • 70.99526

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY0-1182
    • 2 reactions found over 2 reactions in the full pathway
  • PWY0-1466
    • 2 reactions found over 2 reactions in the full pathway