Difference between revisions of "SJ03402"

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(Created page with "Category:metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=All-trans-Retinyl-Esters All-trans-Retinyl-Esters] == * common-name: ** an all-trans-retinyl es...")
(Created page with "Category:gene == Gene SJ03402 == * transcription-direction: ** negative * right-end-position: ** 145335 * left-end-position: ** 117413 * centisome-position: ** 22.346674...")
 
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[[Category:metabolite]]
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[[Category:gene]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=All-trans-Retinyl-Esters All-trans-Retinyl-Esters] ==
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== Gene SJ03402 ==
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* common-name:
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* transcription-direction:
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** an all-trans-retinyl ester
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** negative
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== Reaction(s) known to consume the compound ==
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* right-end-position:
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* [[RETINOL-O-FATTY-ACYLTRANSFERASE-RXN]]
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** 145335
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* [[RXN-12575]]
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* left-end-position:
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== Reaction(s) known to produce the compound ==
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** 117413
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* [[RETINOL-O-FATTY-ACYLTRANSFERASE-RXN]]
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* centisome-position:
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== Reaction(s) of unknown directionality ==
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** 22.346674   
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{{#set: common-name=an all-trans-retinyl ester}}
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== Organism(s) associated with this gene  ==
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* [[S.japonica_carotenoid_curated]]
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== Reaction(s) associated ==
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<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
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* [[CATAL-RXN]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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** Category: [[orthology]]
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*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
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*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
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*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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* [[PEROXID-RXN]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN-14189]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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** Category: [[orthology]]
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*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
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*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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* [[RXN-14240]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN-15288]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN-17352]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN-8635]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN66-1]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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** Category: [[orthology]]
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*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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</div>
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== Pathway(s) associated ==
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<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
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* [[PWY-5506]]
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** '''1''' reactions found over '''2''' reactions in the full pathway
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* [[DETOX1-PWY-1]]
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** '''4''' reactions found over '''4''' reactions in the full pathway
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* [[DETOX1-PWY]]
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** '''2''' reactions found over '''2''' reactions in the full pathway
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* [[PWY-7214]]
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** '''1''' reactions found over '''2''' reactions in the full pathway
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* [[PWY-7445]]
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** '''1''' reactions found over '''4''' reactions in the full pathway
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* [[PWY-5466]]
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** '''2''' reactions found over '''10''' reactions in the full pathway
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* [[PWY-6824]]
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** '''2''' reactions found over '''10''' reactions in the full pathway
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* [[PWY-5469]]
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** '''2''' reactions found over '''8''' reactions in the full pathway
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* [[PWY-5461]]
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** '''1''' reactions found over '''1''' reactions in the full pathway
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* [[PWY66-162]]
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** '''3''' reactions found over '''3''' reactions in the full pathway
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</div>
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{{#set: transcription-direction=negative}}
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{{#set: right-end-position=145335}}
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{{#set: left-end-position=117413}}
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{{#set: centisome-position=22.346674    }}
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{{#set: organism associated=S.japonica_carotenoid_curated}}
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{{#set: nb reaction associated=8}}
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{{#set: nb pathway associated=10}}

Latest revision as of 11:01, 18 March 2021

Gene SJ03402

  • transcription-direction:
    • negative
  • right-end-position:
    • 145335
  • left-end-position:
    • 117413
  • centisome-position:
    • 22.346674

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-5506
    • 1 reactions found over 2 reactions in the full pathway
  • DETOX1-PWY-1
    • 4 reactions found over 4 reactions in the full pathway
  • DETOX1-PWY
    • 2 reactions found over 2 reactions in the full pathway
  • PWY-7214
    • 1 reactions found over 2 reactions in the full pathway
  • PWY-7445
    • 1 reactions found over 4 reactions in the full pathway
  • PWY-5466
    • 2 reactions found over 10 reactions in the full pathway
  • PWY-6824
    • 2 reactions found over 10 reactions in the full pathway
  • PWY-5469
    • 2 reactions found over 8 reactions in the full pathway
  • PWY-5461
    • 1 reactions found over 1 reactions in the full pathway
  • PWY66-162
    • 3 reactions found over 3 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ03402&oldid=132112"