Difference between revisions of "SJ03410"

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(Created page with "Category:gene == Gene SJ19927 == * transcription-direction: ** positive * right-end-position: ** 61070 * left-end-position: ** 52562 * centisome-position: ** 8.422546...")
(Created page with "Category:gene == Gene SJ14690 == * transcription-direction: ** negative * right-end-position: ** 120626 * left-end-position: ** 113409 * centisome-position: ** 36.51241...")
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[[Category:gene]]
 
[[Category:gene]]
== Gene SJ19927 ==
+
== Gene SJ14690 ==
 
* transcription-direction:
 
* transcription-direction:
** positive
+
** negative
 
* right-end-position:
 
* right-end-position:
** 61070
+
** 120626
 
* left-end-position:
 
* left-end-position:
** 52562
+
** 113409
 
* centisome-position:
 
* centisome-position:
** 8.422546    
+
** 36.51241    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
* [[S.japonica_carotenoid_curated]]
+
* [[S.japonica_sterols_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
* [[RXN-13185]]
+
* [[GDPPYPHOSKIN-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
* [[RXN-7984]]
+
* [[GTPPYPHOSKIN-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
** Category: [[orthology]]
+
* [[PPGPPSYN-RXN]]
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
* [[RXN-7985]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
** Category: [[orthology]]
+
* [[RXN0-6427]]
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
* [[RXN1F-20]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
* [[PWY-5945]]
+
* [[PPGPPMET-PWY]]
** '''4''' reactions found over '''4''' reactions in the full pathway
+
** '''5''' reactions found over '''6''' reactions in the full pathway
* [[PWY-5531]]
+
{{#set: transcription-direction=negative}}
** '''4''' reactions found over '''9''' reactions in the full pathway
+
{{#set: right-end-position=120626}}
* [[CHLOROPHYLL-SYN]]
+
{{#set: left-end-position=113409}}
** '''6''' reactions found over '''9''' reactions in the full pathway
+
{{#set: centisome-position=36.51241   }}
* [[PWY-7159]]
+
{{#set: organism associated=S.japonica_sterols_curated}}
** '''5''' reactions found over '''9''' reactions in the full pathway
 
{{#set: transcription-direction=positive}}
 
{{#set: right-end-position=61070}}
 
{{#set: left-end-position=52562}}
 
{{#set: centisome-position=8.422546   }}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
 
{{#set: nb reaction associated=4}}
 
{{#set: nb reaction associated=4}}
{{#set: nb pathway associated=4}}
+
{{#set: nb pathway associated=1}}

Revision as of 20:28, 18 December 2020

Gene SJ14690

  • transcription-direction:
    • negative
  • right-end-position:
    • 120626
  • left-end-position:
    • 113409
  • centisome-position:
    • 36.51241

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PPGPPMET-PWY
    • 5 reactions found over 6 reactions in the full pathway