Difference between revisions of "SJ03464"
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(Created page with "Category:metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=Charged-CYS-tRNAs Charged-CYS-tRNAs] == * common-name: ** an l-cysteinyl-[trnacys] == Reaction(...") |
(Created page with "Category:gene == Gene SJ03464 == * transcription-direction: ** positive * right-end-position: ** 104791 * left-end-position: ** 103898 * centisome-position: ** 86.20452...") |
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− | [[Category: | + | [[Category:gene]] |
− | == | + | == Gene SJ03464 == |
− | * | + | * transcription-direction: |
− | ** | + | ** positive |
− | == | + | * right-end-position: |
− | * [[ | + | ** 104791 |
− | == Reaction(s) | + | * left-end-position: |
− | * [[ | + | ** 103898 |
− | == | + | * centisome-position: |
− | {{#set: | + | ** 86.20452 |
+ | == Organism(s) associated with this gene == | ||
+ | * [[S.japonica_carotenoid_curated]] | ||
+ | == Reaction(s) associated == | ||
+ | * [[4OH2OXOGLUTARALDOL-RXN]] | ||
+ | ** Category: [[orthology]] | ||
+ | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
+ | * [[DEHYDDEOXPHOSGALACT-ALDOL-RXN]] | ||
+ | ** Category: [[annotation]] | ||
+ | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
+ | ** Category: [[orthology]] | ||
+ | *** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a | ||
+ | * [[KDPGALDOL-RXN]] | ||
+ | ** Category: [[orthology]] | ||
+ | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
+ | * [[RXN-13990]] | ||
+ | ** Category: [[orthology]] | ||
+ | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
+ | == Pathway(s) associated == | ||
+ | <div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;"> | ||
+ | * [[HYDROXYPRODEG-PWY]] | ||
+ | ** '''1''' reactions found over '''5''' reactions in the full pathway | ||
+ | * [[PWY-7130]] | ||
+ | ** '''1''' reactions found over '''7''' reactions in the full pathway | ||
+ | * [[GALACTCAT-PWY]] | ||
+ | ** '''1''' reactions found over '''3''' reactions in the full pathway | ||
+ | * [[PWY-6507]] | ||
+ | ** '''1''' reactions found over '''5''' reactions in the full pathway | ||
+ | * [[PWY-7310]] | ||
+ | ** '''1''' reactions found over '''3''' reactions in the full pathway | ||
+ | * [[PWY-2221]] | ||
+ | ** '''6''' reactions found over '''9''' reactions in the full pathway | ||
+ | * [[ENTNER-DOUDOROFF-PWY]] | ||
+ | ** '''2''' reactions found over '''2''' reactions in the full pathway | ||
+ | * [[PWY-7562]] | ||
+ | ** '''1''' reactions found over '''7''' reactions in the full pathway | ||
+ | * [[PWY-7242]] | ||
+ | ** '''1''' reactions found over '''4''' reactions in the full pathway | ||
+ | * [[GALACTUROCAT-PWY]] | ||
+ | ** '''1''' reactions found over '''5''' reactions in the full pathway | ||
+ | </div> | ||
+ | {{#set: transcription-direction=positive}} | ||
+ | {{#set: right-end-position=104791}} | ||
+ | {{#set: left-end-position=103898}} | ||
+ | {{#set: centisome-position=86.20452 }} | ||
+ | {{#set: organism associated=S.japonica_carotenoid_curated}} | ||
+ | {{#set: nb reaction associated=4}} | ||
+ | {{#set: nb pathway associated=10}} |
Latest revision as of 11:02, 18 March 2021
Contents
Gene SJ03464
- transcription-direction:
- positive
- right-end-position:
- 104791
- left-end-position:
- 103898
- centisome-position:
- 86.20452
Organism(s) associated with this gene
Reaction(s) associated
- 4OH2OXOGLUTARALDOL-RXN
- Category: orthology
- source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- Category: orthology
- DEHYDDEOXPHOSGALACT-ALDOL-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: orthology
- source: output_pantograph_nannochloropsis_salina; tool: pantograph; comment: n.a
- Category: annotation
- KDPGALDOL-RXN
- Category: orthology
- source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- Category: orthology
- RXN-13990
- Category: orthology
- source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- Category: orthology
Pathway(s) associated
- HYDROXYPRODEG-PWY
- 1 reactions found over 5 reactions in the full pathway
- PWY-7130
- 1 reactions found over 7 reactions in the full pathway
- GALACTCAT-PWY
- 1 reactions found over 3 reactions in the full pathway
- PWY-6507
- 1 reactions found over 5 reactions in the full pathway
- PWY-7310
- 1 reactions found over 3 reactions in the full pathway
- PWY-2221
- 6 reactions found over 9 reactions in the full pathway
- ENTNER-DOUDOROFF-PWY
- 2 reactions found over 2 reactions in the full pathway
- PWY-7562
- 1 reactions found over 7 reactions in the full pathway
- PWY-7242
- 1 reactions found over 4 reactions in the full pathway
- GALACTUROCAT-PWY
- 1 reactions found over 5 reactions in the full pathway