Difference between revisions of "SJ03464"

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(Created page with "Category:metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-1828 CPD-1828] == * common-name: ** gdp-α-d-mannuronate * smiles: ** c(op(=o)([o-])op...")
(Created page with "Category:gene == Gene SJ03464 == * transcription-direction: ** positive * right-end-position: ** 104791 * left-end-position: ** 103898 * centisome-position: ** 86.20452...")
 
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[[Category:metabolite]]
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[[Category:gene]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-1828 CPD-1828] ==
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== Gene SJ03464 ==
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* common-name:
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* transcription-direction:
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** gdp-α-d-mannuronate
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** positive
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* smiles:
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* right-end-position:
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** c(op(=o)([o-])op(=o)([o-])oc1(oc(c(=o)[o-])c(o)c(o)c(o)1))c2(oc(c(o)c(o)2)n4(c=nc3(c(=o)nc(n)=nc=34)))
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** 104791
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* inchi-key:
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* left-end-position:
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** dnbsdudynpjvcn-zxtxfpbhsa-k
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** 103898
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* molecular-weight:
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* centisome-position:
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** 616.305
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** 86.20452   
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== Reaction(s) known to consume the compound ==
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== Organism(s) associated with this gene  ==
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* [[ALGINATE-SYNTHASE-RXN]]
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* [[S.japonica_carotenoid_curated]]
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== Reaction(s) known to produce the compound ==
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== Reaction(s) associated ==
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* [[GDP-MANNOSE-6-DEHYDROGENASE-RXN]]
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* [[4OH2OXOGLUTARALDOL-RXN]]
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== Reaction(s) of unknown directionality ==
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** Category: [[orthology]]
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{{#set: common-name=gdp-α-d-mannuronate}}
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*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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{{#set: inchi-key=inchikey=dnbsdudynpjvcn-zxtxfpbhsa-k}}
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* [[DEHYDDEOXPHOSGALACT-ALDOL-RXN]]
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{{#set: molecular-weight=616.305}}
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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** Category: [[orthology]]
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*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
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* [[KDPGALDOL-RXN]]
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** Category: [[orthology]]
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*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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* [[RXN-13990]]
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** Category: [[orthology]]
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*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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== Pathway(s) associated ==
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<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
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* [[HYDROXYPRODEG-PWY]]
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** '''1''' reactions found over '''5''' reactions in the full pathway
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* [[PWY-7130]]
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** '''1''' reactions found over '''7''' reactions in the full pathway
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* [[GALACTCAT-PWY]]
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** '''1''' reactions found over '''3''' reactions in the full pathway
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* [[PWY-6507]]
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** '''1''' reactions found over '''5''' reactions in the full pathway
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* [[PWY-7310]]
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** '''1''' reactions found over '''3''' reactions in the full pathway
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* [[PWY-2221]]
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** '''6''' reactions found over '''9''' reactions in the full pathway
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* [[ENTNER-DOUDOROFF-PWY]]
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** '''2''' reactions found over '''2''' reactions in the full pathway
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* [[PWY-7562]]
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** '''1''' reactions found over '''7''' reactions in the full pathway
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* [[PWY-7242]]
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** '''1''' reactions found over '''4''' reactions in the full pathway
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* [[GALACTUROCAT-PWY]]
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** '''1''' reactions found over '''5''' reactions in the full pathway
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</div>
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{{#set: transcription-direction=positive}}
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{{#set: right-end-position=104791}}
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{{#set: left-end-position=103898}}
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{{#set: centisome-position=86.20452    }}
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{{#set: organism associated=S.japonica_carotenoid_curated}}
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{{#set: nb reaction associated=4}}
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{{#set: nb pathway associated=10}}

Latest revision as of 11:02, 18 March 2021

Gene SJ03464

  • transcription-direction:
    • positive
  • right-end-position:
    • 104791
  • left-end-position:
    • 103898
  • centisome-position:
    • 86.20452

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • HYDROXYPRODEG-PWY
    • 1 reactions found over 5 reactions in the full pathway
  • PWY-7130
    • 1 reactions found over 7 reactions in the full pathway
  • GALACTCAT-PWY
    • 1 reactions found over 3 reactions in the full pathway
  • PWY-6507
    • 1 reactions found over 5 reactions in the full pathway
  • PWY-7310
    • 1 reactions found over 3 reactions in the full pathway
  • PWY-2221
    • 6 reactions found over 9 reactions in the full pathway
  • ENTNER-DOUDOROFF-PWY
    • 2 reactions found over 2 reactions in the full pathway
  • PWY-7562
    • 1 reactions found over 7 reactions in the full pathway
  • PWY-7242
    • 1 reactions found over 4 reactions in the full pathway
  • GALACTUROCAT-PWY
    • 1 reactions found over 5 reactions in the full pathway




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