Difference between revisions of "SJ03483"

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(Created page with "Category:metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-12461 CPD-12461] == * smiles: ** cc(=cccc(=cccc(=cccc(c)=cccc(c)=cccc(c)=cccc(c)=cccc(c)=cc...")
(Created page with "Category:gene == Gene SJ04905 == * transcription-direction: ** positive * right-end-position: ** 56193 * left-end-position: ** 52834 * centisome-position: ** 53.687634...")
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[[Category:metabolite]]
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[[Category:gene]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-12461 CPD-12461] ==
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== Gene SJ04905 ==
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* smiles:
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* transcription-direction:
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** cc(=cccc(=cccc(=cccc(c)=cccc(c)=cccc(c)=cccc(c)=cccc(c)=cccc(c)=cccc(c)=cccc(c)=ccop([o-])(=o)op([o-])([o-])=o)c)c)c
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** positive
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* common-name:
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* right-end-position:
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** tri-trans,hepta-cis-undecaprenyl diphosphate
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** 56193
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* molecular-weight:
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* left-end-position:
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** 924.251
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** 52834
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== Reaction(s) known to consume the compound ==
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* centisome-position:
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== Reaction(s) known to produce the compound ==
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** 53.687634   
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* [[RXN-11488]]
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== Organism(s) associated with this gene  ==
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== Reaction(s) of unknown directionality ==
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* [[S.japonica_sterols_curated]]
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{{#set: common-name=tri-trans,hepta-cis-undecaprenyl diphosphate}}
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== Reaction(s) associated ==
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{{#set: molecular-weight=924.251}}
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* [[RIBULP3EPIM-RXN]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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** Category: [[orthology]]
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*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
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*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
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*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
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*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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== Pathway(s) associated ==
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* [[PWY-1861]]
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** '''7''' reactions found over '''9''' reactions in the full pathway
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* [[P21-PWY]]
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** '''3''' reactions found over '''3''' reactions in the full pathway
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* [[NONOXIPENT-PWY]]
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** '''5''' reactions found over '''5''' reactions in the full pathway
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* [[PWY-5723]]
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** '''10''' reactions found over '''10''' reactions in the full pathway
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* [[P124-PWY]]
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** '''12''' reactions found over '''15''' reactions in the full pathway
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* [[CALVIN-PWY]]
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** '''12''' reactions found over '''13''' reactions in the full pathway
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* [[P122-PWY]]
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** '''16''' reactions found over '''18''' reactions in the full pathway
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* [[P185-PWY]]
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** '''11''' reactions found over '''12''' reactions in the full pathway
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{{#set: transcription-direction=positive}}
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{{#set: right-end-position=56193}}
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{{#set: left-end-position=52834}}
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{{#set: centisome-position=53.687634    }}
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{{#set: organism associated=S.japonica_sterols_curated}}
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{{#set: nb reaction associated=1}}
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{{#set: nb pathway associated=8}}

Revision as of 20:22, 18 December 2020

Gene SJ04905

  • transcription-direction:
    • positive
  • right-end-position:
    • 56193
  • left-end-position:
    • 52834
  • centisome-position:
    • 53.687634

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-1861
    • 7 reactions found over 9 reactions in the full pathway
  • P21-PWY
    • 3 reactions found over 3 reactions in the full pathway
  • NONOXIPENT-PWY
    • 5 reactions found over 5 reactions in the full pathway
  • PWY-5723
    • 10 reactions found over 10 reactions in the full pathway
  • P124-PWY
    • 12 reactions found over 15 reactions in the full pathway
  • CALVIN-PWY
    • 12 reactions found over 13 reactions in the full pathway
  • P122-PWY
    • 16 reactions found over 18 reactions in the full pathway
  • P185-PWY
    • 11 reactions found over 12 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ03483&oldid=41940"