Difference between revisions of "SJ03520"

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(Created page with "Category:gene == Gene SJ02350 == * transcription-direction: ** negative * right-end-position: ** 290459 * left-end-position: ** 280039 * centisome-position: ** 51.667427...")
(Created page with "Category:gene == Gene SJ14175 == * transcription-direction: ** positive * right-end-position: ** 564341 * left-end-position: ** 552588 * centisome-position: ** 76.91295...")
Line 1: Line 1:
 
[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ02350 ==
+
== Gene SJ14175 ==
 
* transcription-direction:
 
* transcription-direction:
−
** negative
+
** positive
 
* right-end-position:
 
* right-end-position:
−
** 290459
+
** 564341
 
* left-end-position:
 
* left-end-position:
−
** 280039
+
** 552588
 
* centisome-position:
 
* centisome-position:
−
** 51.667427    
+
** 76.91295    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
−
* [[S.japonica_sterols_curated]]
+
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[3.1.31.1-RXN]]
+
* [[4-NITROPHENYLPHOSPHATASE-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
{{#set: transcription-direction=negative}}
+
* [[F16BDEPHOS-RXN]]
−
{{#set: right-end-position=290459}}
+
** Category: [[annotation]]
−
{{#set: left-end-position=280039}}
+
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
{{#set: centisome-position=51.667427   }}
+
** Category: [[orthology]]
−
{{#set: organism associated=S.japonica_sterols_curated}}
+
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
−
{{#set: nb reaction associated=1}}
+
* [[SUGAR-PHOSPHATASE-RXN]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
== Pathway(s) associated ==
 +
* [[P185-PWY]]
 +
** '''11''' reactions found over '''12''' reactions in the full pathway
 +
* [[PWY66-399]]
 +
** '''11''' reactions found over '''12''' reactions in the full pathway
 +
* [[SUCSYN-PWY]]
 +
** '''6''' reactions found over '''7''' reactions in the full pathway
 +
* [[CALVIN-PWY]]
 +
** '''12''' reactions found over '''13''' reactions in the full pathway
 +
* [[GLUCONEO-PWY]]
 +
** '''12''' reactions found over '''13''' reactions in the full pathway
 +
* [[PWY-5484]]
 +
** '''10''' reactions found over '''11''' reactions in the full pathway
 +
* [[GLYCOLYSIS]]
 +
** '''11''' reactions found over '''12''' reactions in the full pathway
 +
{{#set: transcription-direction=positive}}
 +
{{#set: right-end-position=564341}}
 +
{{#set: left-end-position=552588}}
 +
{{#set: centisome-position=76.91295   }}
 +
{{#set: organism associated=S.japonica_carotenoid_curated}}
 +
{{#set: nb reaction associated=3}}
 +
{{#set: nb pathway associated=7}}

Revision as of 14:43, 5 January 2021

Gene SJ14175

  • transcription-direction:
    • positive
  • right-end-position:
    • 564341
  • left-end-position:
    • 552588
  • centisome-position:
    • 76.91295

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • P185-PWY
    • 11 reactions found over 12 reactions in the full pathway
  • PWY66-399
    • 11 reactions found over 12 reactions in the full pathway
  • SUCSYN-PWY
    • 6 reactions found over 7 reactions in the full pathway
  • CALVIN-PWY
    • 12 reactions found over 13 reactions in the full pathway
  • GLUCONEO-PWY
    • 12 reactions found over 13 reactions in the full pathway
  • PWY-5484
    • 10 reactions found over 11 reactions in the full pathway
  • GLYCOLYSIS
    • 11 reactions found over 12 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ03520&oldid=53605"