Difference between revisions of "SJ03523"

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(Created page with "Category:gene == Gene SJ12431 == * transcription-direction: ** negative * right-end-position: ** 323433 * left-end-position: ** 304855 * centisome-position: ** 85.16407...")
(Created page with "Category:gene == Gene SJ20976 == * transcription-direction: ** positive * right-end-position: ** 75696 * left-end-position: ** 61598 * centisome-position: ** 30.591742...")
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[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ12431 ==
+
== Gene SJ20976 ==
 
* transcription-direction:
 
* transcription-direction:
−
** negative
+
** positive
 
* right-end-position:
 
* right-end-position:
−
** 323433
+
** 75696
 
* left-end-position:
 
* left-end-position:
−
** 304855
+
** 61598
 
* centisome-position:
 
* centisome-position:
−
** 85.16407    
+
** 30.591742    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[RXN-5286]]
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 +
* [[4-NITROPHENYLPHOSPHATASE-RXN]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[MYO-INOSITOL-1OR-4-MONOPHOSPHATASE-RXN]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[RXN-10949]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-10952]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[RXN-10953]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-10954]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-7253]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[RXN0-5408]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
−
* [[RXN1F-72]]
+
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[RXNQT-4142]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
</div>
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
* [[PWY-5086]]
+
* [[PWY-2301]]
 
** '''2''' reactions found over '''2''' reactions in the full pathway
 
** '''2''' reactions found over '''2''' reactions in the full pathway
−
* [[PWY-7760]]
+
* [[PWY-6363]]
−
** '''1''' reactions found over '''30''' reactions in the full pathway
+
** '''3''' reactions found over '''3''' reactions in the full pathway
−
* [[PWY-7758]]
+
* [[PWY-4702]]
−
** '''1''' reactions found over '''14''' reactions in the full pathway
+
** '''3''' reactions found over '''14''' reactions in the full pathway
−
* [[PWY-7759]]
+
* [[PWY-882]]
−
** '''1''' reactions found over '''18''' reactions in the full pathway
+
** '''6''' reactions found over '''5''' reactions in the full pathway
−
* [[PWY-5064]]
+
{{#set: transcription-direction=positive}}
−
** '''5''' reactions found over '''5''' reactions in the full pathway
+
{{#set: right-end-position=75696}}
−
* [[PWY-5526]]
+
{{#set: left-end-position=61598}}
−
** '''5''' reactions found over '''13''' reactions in the full pathway
+
{{#set: centisome-position=30.591742   }}
−
{{#set: transcription-direction=negative}}
 
−
{{#set: right-end-position=323433}}
 
−
{{#set: left-end-position=304855}}
 
−
{{#set: centisome-position=85.16407   }}
 
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=2}}
+
{{#set: nb reaction associated=9}}
−
{{#set: nb pathway associated=6}}
+
{{#set: nb pathway associated=4}}

Revision as of 08:21, 15 March 2021

Gene SJ20976

  • transcription-direction:
    • positive
  • right-end-position:
    • 75696
  • left-end-position:
    • 61598
  • centisome-position:
    • 30.591742

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-2301
    • 2 reactions found over 2 reactions in the full pathway
  • PWY-6363
    • 3 reactions found over 3 reactions in the full pathway
  • PWY-4702
    • 3 reactions found over 14 reactions in the full pathway
  • PWY-882
    • 6 reactions found over 5 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ03523&oldid=122602"