Difference between revisions of "SJ03554"

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(Created page with "Category:gene == Gene SJ17281 == * transcription-direction: ** negative * right-end-position: ** 210096 * left-end-position: ** 202656 * centisome-position: ** 76.40851...")
(Created page with "Category:gene == Gene SJ03554 == * transcription-direction: ** positive * right-end-position: ** 31339 * left-end-position: ** 1656 * centisome-position: ** 1.3874924...")
 
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[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ17281 ==
+
== Gene SJ03554 ==
 
* transcription-direction:
 
* transcription-direction:
−
** negative
+
** positive
 
* right-end-position:
 
* right-end-position:
−
** 210096
+
** 31339
 
* left-end-position:
 
* left-end-position:
−
** 202656
+
** 1656
 
* centisome-position:
 
* centisome-position:
−
** 76.40851    
+
** 1.3874924    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
−
* [[S.japonica_sterols_curated]]
+
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 
 
* [[2.7.10.1-RXN]]
 
* [[2.7.10.1-RXN]]
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
* [[3.6.4.4-RXN]]
 
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
* [[ATPASE-RXN]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[NUCLEOSIDE-TRIPHOSPHATASE-RXN]]
+
* [[2.7.11.25-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[PROTEIN-KINASE-RXN]]
+
* [[2.7.12.1-RXN]]
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
−
* [[RXN-12195]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN-12196]]
+
* [[PROTEIN-KINASE-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RXN0-5462]]
+
* [[RXN-14906]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
</div>
+
* [[RXN-8443]]
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
* [[PWY-6545]]
+
* [[PWY-5381]]
−
** '''8''' reactions found over '''9''' reactions in the full pathway
+
** '''6''' reactions found over '''11''' reactions in the full pathway
−
* [[PWY-7210]]
+
{{#set: transcription-direction=positive}}
−
** '''8''' reactions found over '''8''' reactions in the full pathway
+
{{#set: right-end-position=31339}}
−
* [[PWY-7198]]
+
{{#set: left-end-position=1656}}
−
** '''6''' reactions found over '''7''' reactions in the full pathway
+
{{#set: centisome-position=1.3874924   }}
−
* [[PWY-7184]]
+
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
** '''9''' reactions found over '''9''' reactions in the full pathway
+
{{#set: nb reaction associated=6}}
−
{{#set: transcription-direction=negative}}
+
{{#set: nb pathway associated=1}}
−
{{#set: right-end-position=210096}}
 
−
{{#set: left-end-position=202656}}
 
−
{{#set: centisome-position=76.40851   }}
 
−
{{#set: organism associated=S.japonica_sterols_curated}}
 
−
{{#set: nb reaction associated=8}}
 
−
{{#set: nb pathway associated=4}}
 

Latest revision as of 11:04, 18 March 2021

Gene SJ03554

  • transcription-direction:
    • positive
  • right-end-position:
    • 31339
  • left-end-position:
    • 1656
  • centisome-position:
    • 1.3874924

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-5381
    • 6 reactions found over 11 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ03554&oldid=133316"