Difference between revisions of "SJ03627"

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(Created page with "Category:gene == Gene SJ12927 == * transcription-direction: ** negative * right-end-position: ** 250575 * left-end-position: ** 223120 * centisome-position: ** 63.943142...")
(Created page with "Category:gene == Gene SJ03627 == * transcription-direction: ** positive * right-end-position: ** 509499 * left-end-position: ** 506161 * centisome-position: ** 49.596786...")
 
(4 intermediate revisions by 2 users not shown)
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[[Category:gene]]
 
[[Category:gene]]
== Gene SJ12927 ==
+
== Gene SJ03627 ==
 
* transcription-direction:
 
* transcription-direction:
** negative
+
** positive
 
* right-end-position:
 
* right-end-position:
** 250575
+
** 509499
 
* left-end-position:
 
* left-end-position:
** 223120
+
** 506161
 
* centisome-position:
 
* centisome-position:
** 63.943142    
+
** 49.596786    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
* [[2.7.11.24-RXN]]
+
* [[TRNA-PSEUDOURIDINE-SYNTHASE-I-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
* [[PROTEIN-KINASE-RXN]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
** Category: [[orthology]]
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
* [[RXN-8443]]
 
 
** Category: [[orthology]]
 
** Category: [[orthology]]
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
== Pathway(s) associated ==
+
{{#set: transcription-direction=positive}}
* [[PWY-5381]]
+
{{#set: right-end-position=509499}}
** '''6''' reactions found over '''11''' reactions in the full pathway
+
{{#set: left-end-position=506161}}
{{#set: transcription-direction=negative}}
+
{{#set: centisome-position=49.596786   }}
{{#set: right-end-position=250575}}
 
{{#set: left-end-position=223120}}
 
{{#set: centisome-position=63.943142   }}
 
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
{{#set: nb reaction associated=3}}
+
{{#set: nb reaction associated=1}}
{{#set: nb pathway associated=1}}
 

Latest revision as of 11:06, 18 March 2021

Gene SJ03627

  • transcription-direction:
    • positive
  • right-end-position:
    • 509499
  • left-end-position:
    • 506161
  • centisome-position:
    • 49.596786

Organism(s) associated with this gene

Reaction(s) associated