Difference between revisions of "SJ03647"

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(Created page with "Category:metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-7005 CPD-7005] == * common-name: ** geranylgeranyl chlorophyll a * smiles: ** c=cc2(=c(c)c5...")
(Created page with "Category:gene == Gene SJ03647 == * transcription-direction: ** positive * right-end-position: ** 83443 * left-end-position: ** 73582 * centisome-position: ** 7.21002 =...")
 
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[[Category:metabolite]]
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[[Category:gene]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-7005 CPD-7005] ==
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== Gene SJ03647 ==
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* common-name:
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* transcription-direction:
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** geranylgeranyl chlorophyll a
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** positive
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* smiles:
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* right-end-position:
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** c=cc2(=c(c)c5(=cc1(c(c)c(ccc(=o)occ=c(c)ccc=c(c)ccc=c(c)ccc=c(c)c)c(n=1)=c7([c-](c(oc)=o)c(=o)c6(c(c)=c4(n([mg]n(c2=cc3(c(c)=c(cc)c(n=3)=c4))5)c=67))))))
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** 83443
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* inchi-key:
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* left-end-position:
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** qblsepresqjtci-znlwzyposa-m
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** 73582
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* molecular-weight:
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* centisome-position:
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** 886.447
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** 7.21002   
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== Reaction(s) known to consume the compound ==
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== Organism(s) associated with this gene  ==
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* [[RXN-17428]]
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* [[S.japonica_carotenoid_curated]]
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* [[RXN-7664]]
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== Reaction(s) associated ==
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== Reaction(s) known to produce the compound ==
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* [[ATPASE-RXN]]
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* [[RXN-7663]]
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** Category: [[annotation]]
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== Reaction(s) of unknown directionality ==
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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{{#set: common-name=geranylgeranyl chlorophyll a}}
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** Category: [[orthology]]
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{{#set: inchi-key=inchikey=qblsepresqjtci-znlwzyposa-m}}
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*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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{{#set: molecular-weight=886.447}}
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* [[NUCLEOSIDE-TRIPHOSPHATASE-RXN]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN-12195]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN-12196]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN0-5462]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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== Pathway(s) associated ==
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* [[PWY-6545]]
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** '''8''' reactions found over '''9''' reactions in the full pathway
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* [[PWY-7210]]
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** '''8''' reactions found over '''8''' reactions in the full pathway
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* [[PWY-7198]]
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** '''6''' reactions found over '''7''' reactions in the full pathway
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* [[PWY-7184]]
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** '''9''' reactions found over '''9''' reactions in the full pathway
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{{#set: transcription-direction=positive}}
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{{#set: right-end-position=83443}}
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{{#set: left-end-position=73582}}
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{{#set: centisome-position=7.21002    }}
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{{#set: organism associated=S.japonica_carotenoid_curated}}
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{{#set: nb reaction associated=5}}
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{{#set: nb pathway associated=4}}

Latest revision as of 11:04, 18 March 2021

Gene SJ03647

  • transcription-direction:
    • positive
  • right-end-position:
    • 83443
  • left-end-position:
    • 73582
  • centisome-position:
    • 7.21002

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-6545
    • 8 reactions found over 9 reactions in the full pathway
  • PWY-7210
    • 8 reactions found over 8 reactions in the full pathway
  • PWY-7198
    • 6 reactions found over 7 reactions in the full pathway
  • PWY-7184
    • 9 reactions found over 9 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ03647&oldid=133341"