Difference between revisions of "SJ03652"

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(Created page with "Category:pathway == Pathway ENTNER-DOUDOROFF-PWY == * taxonomic-range: ** tax-2759 ** tax-2 * common-name: ** entner-doudoroff pathway i == Reaction(s) found == * KDPGAL...")
(Created page with "Category:gene == Gene SJ04794 == * transcription-direction: ** negative * right-end-position: ** 492337 * left-end-position: ** 471169 * centisome-position: ** 93.24245...")
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[[Category:pathway]]
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[[Category:gene]]
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== Pathway ENTNER-DOUDOROFF-PWY ==
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== Gene SJ04794 ==
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* taxonomic-range:
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* transcription-direction:
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** tax-2759
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** negative
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** tax-2
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* right-end-position:
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* common-name:
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** 492337
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** entner-doudoroff pathway i
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* left-end-position:
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== Reaction(s) found ==
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** 471169
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* [[KDPGALDOL-RXN]]
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* centisome-position:
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* [[PGLUCONDEHYDRAT-RXN]]
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** 93.24245   
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== Reaction(s) not found ==
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== Organism(s) associated with this gene  ==
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All reactions of this pathways are in present
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* [[S.japonica_carotenoid_curated]]
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{{#set: taxonomic-range=tax-2|tax-2759}}
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== Reaction(s) associated ==
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{{#set: common-name=entner-doudoroff pathway i}}
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* [[3.4.21.53-RXN]]
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{{#set: nb reaction found=2}}
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** Category: [[annotation]]
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{{#set: completion rate=1.0}}
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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{{#set: nb total reaction=2}}
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* [[ATPASE-RXN]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[NUCLEOSIDE-TRIPHOSPHATASE-RXN]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN-12195]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN-12196]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN0-5462]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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== Pathway(s) associated ==
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* [[PWY-7210]]
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** '''8''' reactions found over '''8''' reactions in the full pathway
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* [[PWY-7198]]
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** '''6''' reactions found over '''7''' reactions in the full pathway
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* [[PWY-7184]]
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** '''9''' reactions found over '''9''' reactions in the full pathway
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* [[PWY-6545]]
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** '''8''' reactions found over '''9''' reactions in the full pathway
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{{#set: transcription-direction=negative}}
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{{#set: right-end-position=492337}}
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{{#set: left-end-position=471169}}
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{{#set: centisome-position=93.24245    }}
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{{#set: organism associated=S.japonica_carotenoid_curated}}
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{{#set: nb reaction associated=6}}
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{{#set: nb pathway associated=4}}

Revision as of 12:57, 14 January 2021

Gene SJ04794

  • transcription-direction:
    • negative
  • right-end-position:
    • 492337
  • left-end-position:
    • 471169
  • centisome-position:
    • 93.24245

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-7210
    • 8 reactions found over 8 reactions in the full pathway
  • PWY-7198
    • 6 reactions found over 7 reactions in the full pathway
  • PWY-7184
    • 9 reactions found over 9 reactions in the full pathway
  • PWY-6545
    • 8 reactions found over 9 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ03652&oldid=79485"