Difference between revisions of "SJ03655"
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(Created page with "Category:gene == Gene SJ05242 == * transcription-direction: ** negative * right-end-position: ** 107950 * left-end-position: ** 104796 * centisome-position: ** 21.009539...") |
(Created page with "Category:gene == Gene SJ16590 == * transcription-direction: ** negative * right-end-position: ** 202222 * left-end-position: ** 197712 * centisome-position: ** 28.929583...") |
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| Line 1: | Line 1: | ||
[[Category:gene]] | [[Category:gene]] | ||
| − | == Gene | + | == Gene SJ16590 == |
* transcription-direction: | * transcription-direction: | ||
** negative | ** negative | ||
* right-end-position: | * right-end-position: | ||
| − | ** | + | ** 202222 |
* left-end-position: | * left-end-position: | ||
| − | ** | + | ** 197712 |
* centisome-position: | * centisome-position: | ||
| − | ** | + | ** 28.929583 |
== Organism(s) associated with this gene == | == Organism(s) associated with this gene == | ||
* [[S.japonica_carotenoid_curated]] | * [[S.japonica_carotenoid_curated]] | ||
== Reaction(s) associated == | == Reaction(s) associated == | ||
| − | * [[ | + | * [[3-HYDROXYISOBUTYRYL-COA-HYDROLASE-RXN]] |
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
| + | * [[RXN-13721]] | ||
| + | ** Category: [[annotation]] | ||
| + | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
| + | * [[RXN-6384]] | ||
| + | ** Category: [[annotation]] | ||
| + | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
| + | * [[RXN1K-87]] | ||
| + | ** Category: [[orthology]] | ||
| + | *** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a | ||
| + | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
| + | == Pathway(s) associated == | ||
| + | * [[VALDEG-PWY]] | ||
| + | ** '''6''' reactions found over '''8''' reactions in the full pathway | ||
| + | * [[PWY-3941]] | ||
| + | ** '''2''' reactions found over '''6''' reactions in the full pathway | ||
| + | * [[PWY-7574]] | ||
| + | ** '''3''' reactions found over '''5''' reactions in the full pathway | ||
{{#set: transcription-direction=negative}} | {{#set: transcription-direction=negative}} | ||
| − | {{#set: right-end-position= | + | {{#set: right-end-position=202222}} |
| − | {{#set: left-end-position= | + | {{#set: left-end-position=197712}} |
| − | {{#set: centisome-position= | + | {{#set: centisome-position=28.929583 }} |
{{#set: organism associated=S.japonica_carotenoid_curated}} | {{#set: organism associated=S.japonica_carotenoid_curated}} | ||
| − | {{#set: nb reaction associated= | + | {{#set: nb reaction associated=4}} |
| + | {{#set: nb pathway associated=3}} | ||
Revision as of 11:05, 15 January 2021
Contents
Gene SJ16590
- transcription-direction:
- negative
- right-end-position:
- 202222
- left-end-position:
- 197712
- centisome-position:
- 28.929583
Organism(s) associated with this gene
Reaction(s) associated
- 3-HYDROXYISOBUTYRYL-COA-HYDROLASE-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- RXN-13721
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- RXN-6384
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- RXN1K-87
- Category: orthology
- source: output_pantograph_arabidopsis_thaliana; tool: pantograph; comment: n.a
- source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- Category: orthology
Pathway(s) associated
- VALDEG-PWY
- 6 reactions found over 8 reactions in the full pathway
- PWY-3941
- 2 reactions found over 6 reactions in the full pathway
- PWY-7574
- 3 reactions found over 5 reactions in the full pathway
