Difference between revisions of "SJ03655"

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(Created page with "Category:metabolite == Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-471 CPD-471] == * common-name: ** (r)-3-amino-2-methylpropanoate * smiles: ** cc(c[n+])c([o...")
 
(Created page with "Category:gene == Gene SJ03655 == * transcription-direction: ** positive * right-end-position: ** 136197 * left-end-position: ** 105471 * centisome-position: ** 10.334702...")
 
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[[Category:metabolite]]
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[[Category:gene]]
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== Metabolite [http://metacyc.org/META/NEW-IMAGE?object=CPD-471 CPD-471] ==
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== Gene SJ03655 ==
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* common-name:
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* transcription-direction:
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** (r)-3-amino-2-methylpropanoate
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** positive
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* smiles:
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* right-end-position:
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** cc(c[n+])c([o-])=o
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** 136197
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* inchi-key:
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* left-end-position:
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** qchpksfmdhpsnr-gsvougtgsa-n
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** 105471
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* molecular-weight:
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* centisome-position:
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** 103.121
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** 10.334702   
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== Reaction(s) known to consume the compound ==
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== Organism(s) associated with this gene  ==
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== Reaction(s) known to produce the compound ==
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* [[S.japonica_carotenoid_curated]]
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* [[RXN-11210]]
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== Reaction(s) associated ==
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== Reaction(s) of unknown directionality ==
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<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
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{{#set: common-name=(r)-3-amino-2-methylpropanoate}}
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* [[PMPOXI-RXN]]
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{{#set: inchi-key=inchikey=qchpksfmdhpsnr-gsvougtgsa-n}}
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** Category: [[annotation]]
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{{#set: molecular-weight=103.121}}
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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** Category: [[orthology]]
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*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
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*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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* [[PNPOXI-RXN]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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** Category: [[orthology]]
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*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
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*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
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* [[PYRIDOXINE-4-OXIDASE-RXN]]
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** Category: [[orthology]]
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*** source: [[output_pantograph_nannochloropsis_salina]]; tool: [[pantograph]]; comment: n.a
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* [[RXN-12752]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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* [[RXN-13142]]
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** Category: [[annotation]]
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*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
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</div>
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== Pathway(s) associated ==
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* [[PLPSAL-PWY]]
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** '''5''' reactions found over '''5''' reactions in the full pathway
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* [[PWY-7204]]
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** '''9''' reactions found over '''9''' reactions in the full pathway
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* [[PYRIDOXSYN-PWY]]
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** '''3''' reactions found over '''7''' reactions in the full pathway
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* [[PWY-7282]]
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** '''6''' reactions found over '''10''' reactions in the full pathway
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* [[PWY-5499]]
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** '''1''' reactions found over '''9''' reactions in the full pathway
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* [[PWY-6938]]
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** '''2''' reactions found over '''4''' reactions in the full pathway
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{{#set: transcription-direction=positive}}
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{{#set: right-end-position=136197}}
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{{#set: left-end-position=105471}}
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{{#set: centisome-position=10.334702    }}
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{{#set: organism associated=S.japonica_carotenoid_curated}}
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{{#set: nb reaction associated=5}}
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{{#set: nb pathway associated=6}}

Latest revision as of 11:04, 18 March 2021

Gene SJ03655

  • transcription-direction:
    • positive
  • right-end-position:
    • 136197
  • left-end-position:
    • 105471
  • centisome-position:
    • 10.334702

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PLPSAL-PWY
    • 5 reactions found over 5 reactions in the full pathway
  • PWY-7204
    • 9 reactions found over 9 reactions in the full pathway
  • PYRIDOXSYN-PWY
    • 3 reactions found over 7 reactions in the full pathway
  • PWY-7282
    • 6 reactions found over 10 reactions in the full pathway
  • PWY-5499
    • 1 reactions found over 9 reactions in the full pathway
  • PWY-6938
    • 2 reactions found over 4 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ03655&oldid=133217"