Difference between revisions of "SJ03706"

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(Created page with "Category:gene == Gene SJ03446 == * transcription-direction: ** positive * right-end-position: ** 79434 * left-end-position: ** 70275 * centisome-position: ** 58.11934...")
(Created page with "Category:gene == Gene SJ01675 == * transcription-direction: ** negative * right-end-position: ** 125317 * left-end-position: ** 112874 * centisome-position: ** 76.9536...")
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[[Category:gene]]
 
[[Category:gene]]
== Gene SJ03446 ==
+
== Gene SJ01675 ==
 
* transcription-direction:
 
* transcription-direction:
** positive
+
** negative
 
* right-end-position:
 
* right-end-position:
** 79434
+
** 125317
 
* left-end-position:
 
* left-end-position:
** 70275
+
** 112874
 
* centisome-position:
 
* centisome-position:
** 58.11934    
+
** 76.9536    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* [[2.7.10.1-RXN]]
* [[3.1.1.64-RXN]]
+
** Category: [[orthology]]
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[2.7.11.25-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
* [[CARBOXYLESTERASE-RXN]]
+
* [[PROTEIN-KINASE-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
* [[RETINYL-PALMITATE-ESTERASE-RXN]]
+
** Category: [[orthology]]
** Category: [[annotation]]
+
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
+
{{#set: transcription-direction=negative}}
* [[RXN-10711]]
+
{{#set: right-end-position=125317}}
** Category: [[annotation]]
+
{{#set: left-end-position=112874}}
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
+
{{#set: centisome-position=76.9536   }}
* [[RXN-10767]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* [[RXN-12252]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* [[RXN-12575]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
* [[RXNQT-4366]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
</div>
 
== Pathway(s) associated ==
 
* [[PWY-6303]]
 
** '''1''' reactions found over '''2''' reactions in the full pathway
 
* [[PWY-6857]]
 
** '''3''' reactions found over '''7''' reactions in the full pathway
 
{{#set: transcription-direction=positive}}
 
{{#set: right-end-position=79434}}
 
{{#set: left-end-position=70275}}
 
{{#set: centisome-position=58.11934   }}
 
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
{{#set: nb reaction associated=8}}
+
{{#set: nb reaction associated=3}}
{{#set: nb pathway associated=2}}
 

Revision as of 13:03, 14 January 2021

Gene SJ01675

  • transcription-direction:
    • negative
  • right-end-position:
    • 125317
  • left-end-position:
    • 112874
  • centisome-position:
    • 76.9536

Organism(s) associated with this gene

Reaction(s) associated