Difference between revisions of "SJ03717"

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(Created page with "Category:gene == Gene SJ03763 == * transcription-direction: ** positive * right-end-position: ** 69412 * left-end-position: ** 54067 * centisome-position: ** 46.180717...")
(Created page with "Category:gene == Gene SJ03717 == * transcription-direction: ** negative * right-end-position: ** 159218 * left-end-position: ** 155325 * centisome-position: ** 29.876226...")
 
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[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ03763 ==
+
== Gene SJ03717 ==
 
* transcription-direction:
 
* transcription-direction:
−
** positive
+
** negative
 
* right-end-position:
 
* right-end-position:
−
** 69412
+
** 159218
 
* left-end-position:
 
* left-end-position:
−
** 54067
+
** 155325
 
* centisome-position:
 
* centisome-position:
−
** 46.180717    
+
** 29.876226    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
+
* [[QUINOLINATE-SYNTHA-RXN]]
−
* [[5.99.1.2-RXN]]
 
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
−
* [[5.99.1.3-RXN]]
+
* [[QUINOLINATE-SYNTHE-MULTI-RXN]]
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
 
** Category: [[orthology]]
 
** Category: [[orthology]]
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
−
* [[ATPASE-RXN]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[NUCLEOSIDE-TRIPHOSPHATASE-RXN]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-12195]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN-12196]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
* [[RXN0-5462]]
 
−
** Category: [[annotation]]
 
−
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
−
</div>
 
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
* [[PWY-7210]]
+
* [[PYRIDNUCSYN-PWY]]
−
** '''8''' reactions found over '''8''' reactions in the full pathway
+
** '''6''' reactions found over '''6''' reactions in the full pathway
−
* [[PWY-7198]]
+
* [[PWY-7342]]
−
** '''6''' reactions found over '''7''' reactions in the full pathway
+
** '''4''' reactions found over '''9''' reactions in the full pathway
−
* [[PWY-7184]]
+
* [[PWY-5316]]
−
** '''9''' reactions found over '''9''' reactions in the full pathway
+
** '''3''' reactions found over '''9''' reactions in the full pathway
−
* [[PWY-6545]]
+
{{#set: transcription-direction=negative}}
−
** '''8''' reactions found over '''9''' reactions in the full pathway
+
{{#set: right-end-position=159218}}
−
{{#set: transcription-direction=positive}}
+
{{#set: left-end-position=155325}}
−
{{#set: right-end-position=69412}}
+
{{#set: centisome-position=29.876226   }}
−
{{#set: left-end-position=54067}}
 
−
{{#set: centisome-position=46.180717   }}
 
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=7}}
+
{{#set: nb reaction associated=2}}
−
{{#set: nb pathway associated=4}}
+
{{#set: nb pathway associated=3}}

Latest revision as of 11:10, 18 March 2021

Gene SJ03717

  • transcription-direction:
    • negative
  • right-end-position:
    • 159218
  • left-end-position:
    • 155325
  • centisome-position:
    • 29.876226

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PYRIDNUCSYN-PWY
    • 6 reactions found over 6 reactions in the full pathway
  • PWY-7342
    • 4 reactions found over 9 reactions in the full pathway
  • PWY-5316
    • 3 reactions found over 9 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ03717&oldid=136199"