Difference between revisions of "SJ03828"

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(Created page with "Category:gene == Gene SJ22175 == * transcription-direction: ** positive * right-end-position: ** 113295 * left-end-position: ** 106400 * centisome-position: ** 59.18641...")
(Created page with "Category:gene == Gene SJ03828 == * transcription-direction: ** negative * right-end-position: ** 65111 * left-end-position: ** 45355 * centisome-position: ** 39.29187...")
 
(One intermediate revision by the same user not shown)
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[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ22175 ==
+
== Gene SJ03828 ==
 
* transcription-direction:
 
* transcription-direction:
−
** positive
+
** negative
 
* right-end-position:
 
* right-end-position:
−
** 113295
+
** 65111
 
* left-end-position:
 
* left-end-position:
−
** 106400
+
** 45355
 
* centisome-position:
 
* centisome-position:
−
** 59.18641    
+
** 39.29187    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[CARBODEHYDRAT-RXN]]
+
* [[ATPASE-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
** Category: [[orthology]]
+
* [[NUCLEOSIDE-TRIPHOSPHATASE-RXN]]
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
+
** Category: [[annotation]]
−
* [[RXN0-5224]]
+
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-12195]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-12196]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN0-5462]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
** Category: [[orthology]]
 
−
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 
 
== Pathway(s) associated ==
 
== Pathway(s) associated ==
−
* [[PWY-6142]]
+
* [[PWY-6545]]
−
** '''10''' reactions found over '''13''' reactions in the full pathway
+
** '''8''' reactions found over '''9''' reactions in the full pathway
−
* [[PWYQT-4429]]
+
* [[PWY-7210]]
−
** '''2''' reactions found over '''2''' reactions in the full pathway
+
** '''8''' reactions found over '''8''' reactions in the full pathway
−
* [[CYANCAT-PWY]]
+
* [[PWY-7198]]
−
** '''2''' reactions found over '''3''' reactions in the full pathway
+
** '''6''' reactions found over '''7''' reactions in the full pathway
−
* [[PWY-5744]]
+
* [[PWY-7184]]
−
** '''4''' reactions found over '''13''' reactions in the full pathway
+
** '''9''' reactions found over '''9''' reactions in the full pathway
−
* [[PWY-5789]]
+
{{#set: transcription-direction=negative}}
−
** '''8''' reactions found over '''18''' reactions in the full pathway
+
{{#set: right-end-position=65111}}
−
* [[PWY-5743]]
+
{{#set: left-end-position=45355}}
−
** '''5''' reactions found over '''13''' reactions in the full pathway
+
{{#set: centisome-position=39.29187   }}
−
* [[PWY-241]]
 
−
** '''5''' reactions found over '''6''' reactions in the full pathway
 
−
* [[PWY-7115]]
 
−
** '''9''' reactions found over '''10''' reactions in the full pathway
 
−
* [[PWY-7117]]
 
−
** '''10''' reactions found over '''12''' reactions in the full pathway
 
−
{{#set: transcription-direction=positive}}
 
−
{{#set: right-end-position=113295}}
 
−
{{#set: left-end-position=106400}}
 
−
{{#set: centisome-position=59.18641   }}
 
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=2}}
+
{{#set: nb reaction associated=5}}
−
{{#set: nb pathway associated=9}}
+
{{#set: nb pathway associated=4}}

Latest revision as of 11:05, 18 March 2021

Gene SJ03828

  • transcription-direction:
    • negative
  • right-end-position:
    • 65111
  • left-end-position:
    • 45355
  • centisome-position:
    • 39.29187

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-6545
    • 8 reactions found over 9 reactions in the full pathway
  • PWY-7210
    • 8 reactions found over 8 reactions in the full pathway
  • PWY-7198
    • 6 reactions found over 7 reactions in the full pathway
  • PWY-7184
    • 9 reactions found over 9 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ03828&oldid=134165"