Difference between revisions of "SJ03867"

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(Created page with "Category:gene == Gene SJ11591 == * transcription-direction: ** negative * right-end-position: ** 160663 * left-end-position: ** 159198 * centisome-position: ** 43.016373...")
(Created page with "Category:gene == Gene SJ03867 == * transcription-direction: ** positive * right-end-position: ** 303524 * left-end-position: ** 294516 * centisome-position: ** 56.716328...")
 
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[[Category:gene]]
 
[[Category:gene]]
−
== Gene SJ11591 ==
+
== Gene SJ03867 ==
 
* transcription-direction:
 
* transcription-direction:
−
** negative
+
** positive
 
* right-end-position:
 
* right-end-position:
−
** 160663
+
** 303524
 
* left-end-position:
 
* left-end-position:
−
** 159198
+
** 294516
 
* centisome-position:
 
* centisome-position:
−
** 43.016373    
+
** 56.716328    
 
== Organism(s) associated with this gene  ==
 
== Organism(s) associated with this gene  ==
 
* [[S.japonica_carotenoid_curated]]
 
* [[S.japonica_carotenoid_curated]]
 
== Reaction(s) associated ==
 
== Reaction(s) associated ==
−
* [[3.1.26.4-RXN]]
+
<div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;">
 +
* [[2.6.1.64-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
* [[RNA-DIRECTED-DNA-POLYMERASE-RXN]]
+
* [[2.6.1.7-RXN]]
 
** Category: [[annotation]]
 
** Category: [[annotation]]
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
−
{{#set: transcription-direction=negative}}
+
** Category: [[orthology]]
−
{{#set: right-end-position=160663}}
+
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
−
{{#set: left-end-position=159198}}
+
* [[PHEAMINOTRANS-RXN]]
−
{{#set: centisome-position=43.016373   }}
+
** Category: [[orthology]]
 +
*** source: [[output_pantograph_arabidopsis_thaliana]]; tool: [[pantograph]]; comment: n.a
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[RXN-10721]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
** Category: [[orthology]]
 +
*** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a
 +
* [[RXN-15582]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
* [[RXN-6763]]
 +
** Category: [[annotation]]
 +
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a
 +
</div>
 +
== Pathway(s) associated ==
 +
* [[PWY-6309]]
 +
** '''7''' reactions found over '''11''' reactions in the full pathway
 +
* [[PWY-7432]]
 +
** '''3''' reactions found over '''2''' reactions in the full pathway
 +
* [[PWY-5079]]
 +
** '''2''' reactions found over '''4''' reactions in the full pathway
 +
* [[ANAPHENOXI-PWY]]
 +
** '''1''' reactions found over '''3''' reactions in the full pathway
 +
* [[PHESYN]]
 +
** '''3''' reactions found over '''3''' reactions in the full pathway
 +
* [[PWY-4061]]
 +
** '''4''' reactions found over '''8''' reactions in the full pathway
 +
* [[PWY-6842]]
 +
** '''5''' reactions found over '''9''' reactions in the full pathway
 +
{{#set: transcription-direction=positive}}
 +
{{#set: right-end-position=303524}}
 +
{{#set: left-end-position=294516}}
 +
{{#set: centisome-position=56.716328   }}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
 
{{#set: organism associated=S.japonica_carotenoid_curated}}
−
{{#set: nb reaction associated=2}}
+
{{#set: nb reaction associated=6}}
 +
{{#set: nb pathway associated=7}}

Latest revision as of 11:06, 18 March 2021

Gene SJ03867

  • transcription-direction:
    • positive
  • right-end-position:
    • 303524
  • left-end-position:
    • 294516
  • centisome-position:
    • 56.716328

Organism(s) associated with this gene

Reaction(s) associated

Pathway(s) associated

  • PWY-6309
    • 7 reactions found over 11 reactions in the full pathway
  • PWY-7432
    • 3 reactions found over 2 reactions in the full pathway
  • PWY-5079
    • 2 reactions found over 4 reactions in the full pathway
  • ANAPHENOXI-PWY
    • 1 reactions found over 3 reactions in the full pathway
  • PHESYN
    • 3 reactions found over 3 reactions in the full pathway
  • PWY-4061
    • 4 reactions found over 8 reactions in the full pathway
  • PWY-6842
    • 5 reactions found over 9 reactions in the full pathway




Retrieved from "https://gem-aureme.genouest.org/sjapgem/index.php?title=SJ03867&oldid=134287"