Difference between revisions of "SJ03883"
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(Created page with "Category:gene == Gene SJ00350 == * transcription-direction: ** negative * right-end-position: ** 133166 * left-end-position: ** 116859 * centisome-position: ** 69.45846...") |
(Created page with "Category:gene == Gene SJ13939 == * transcription-direction: ** positive * right-end-position: ** 90896 * left-end-position: ** 83855 * centisome-position: ** 25.504276...") |
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| Line 1: | Line 1: | ||
[[Category:gene]] | [[Category:gene]] | ||
| − | == Gene | + | == Gene SJ13939 == |
* transcription-direction: | * transcription-direction: | ||
| − | ** | + | ** positive |
* right-end-position: | * right-end-position: | ||
| − | ** | + | ** 90896 |
* left-end-position: | * left-end-position: | ||
| − | ** | + | ** 83855 |
* centisome-position: | * centisome-position: | ||
| − | ** | + | ** 25.504276 |
== Organism(s) associated with this gene == | == Organism(s) associated with this gene == | ||
* [[S.japonica_carotenoid_curated]] | * [[S.japonica_carotenoid_curated]] | ||
== Reaction(s) associated == | == Reaction(s) associated == | ||
| − | * [[RXN | + | <div class="toccolours mw-collapsible mw-collapsed" style="width:100%; overflow:auto;"> |
| + | * [[ASNSYNA-RXN]] | ||
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
| − | * [[RXN | + | * [[ASNSYNB-RXN]] |
** Category: [[annotation]] | ** Category: [[annotation]] | ||
*** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
| + | * [[GLUTAMIN-RXN]] | ||
| + | ** Category: [[annotation]] | ||
| + | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
| + | * [[RXN-16820]] | ||
| + | ** Category: [[annotation]] | ||
| + | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
| + | * [[RXN-16821]] | ||
| + | ** Category: [[annotation]] | ||
| + | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
| + | * [[RXN0-2023]] | ||
| + | ** Category: [[annotation]] | ||
| + | *** source: [[saccharina_japonica_genome]]; tool: [[pathwaytools]]; comment: n.a | ||
| + | * [[RXN0-5144]] | ||
| + | ** Category: [[orthology]] | ||
| + | *** source: [[output_pantograph_ectocarpus_siliculosus]]; tool: [[pantograph]]; comment: n.a | ||
| + | </div> | ||
== Pathway(s) associated == | == Pathway(s) associated == | ||
| − | * [[PWY- | + | * [[ASPARAGINESYN-PWY]] |
| − | ** ''' | + | ** '''1''' reactions found over '''1''' reactions in the full pathway |
| − | * [[PWY- | + | * [[ASPARAGINE-BIOSYNTHESIS]] |
| − | ** '''4''' reactions found over ''' | + | ** '''1''' reactions found over '''1''' reactions in the full pathway |
| − | {{#set: transcription-direction= | + | * [[CITRULBIO-PWY]] |
| − | {{#set: right-end-position= | + | ** '''7''' reactions found over '''8''' reactions in the full pathway |
| − | {{#set: left-end-position= | + | * [[GLUTAMINDEG-PWY]] |
| − | {{#set: centisome-position= | + | ** '''1''' reactions found over '''1''' reactions in the full pathway |
| + | * [[PWY-7889]] | ||
| + | ** '''2''' reactions found over '''4''' reactions in the full pathway | ||
| + | * [[PWY-7892]] | ||
| + | ** '''3''' reactions found over '''8''' reactions in the full pathway | ||
| + | {{#set: transcription-direction=positive}} | ||
| + | {{#set: right-end-position=90896}} | ||
| + | {{#set: left-end-position=83855}} | ||
| + | {{#set: centisome-position=25.504276 }} | ||
{{#set: organism associated=S.japonica_carotenoid_curated}} | {{#set: organism associated=S.japonica_carotenoid_curated}} | ||
| − | {{#set: nb reaction associated= | + | {{#set: nb reaction associated=7}} |
| − | {{#set: nb pathway associated= | + | {{#set: nb pathway associated=6}} |
Revision as of 14:21, 26 August 2019
Contents
Gene SJ13939
- transcription-direction:
- positive
- right-end-position:
- 90896
- left-end-position:
- 83855
- centisome-position:
- 25.504276
Organism(s) associated with this gene
Reaction(s) associated
- ASNSYNA-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- ASNSYNB-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- GLUTAMIN-RXN
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- RXN-16820
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- RXN-16821
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- RXN0-2023
- Category: annotation
- source: saccharina_japonica_genome; tool: pathwaytools; comment: n.a
- Category: annotation
- RXN0-5144
- Category: orthology
- source: output_pantograph_ectocarpus_siliculosus; tool: pantograph; comment: n.a
- Category: orthology
Pathway(s) associated
- ASPARAGINESYN-PWY
- 1 reactions found over 1 reactions in the full pathway
- ASPARAGINE-BIOSYNTHESIS
- 1 reactions found over 1 reactions in the full pathway
- CITRULBIO-PWY
- 7 reactions found over 8 reactions in the full pathway
- GLUTAMINDEG-PWY
- 1 reactions found over 1 reactions in the full pathway
- PWY-7889
- 2 reactions found over 4 reactions in the full pathway
- PWY-7892
- 3 reactions found over 8 reactions in the full pathway
